Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cxcl12P40224 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cxcl12P40224 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cxcl12P40224 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cxcl12P40224 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Cxcl12P40224 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cxcl12P40224 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.47■□□□□ 0.55
Cxcl12P40224 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cxcl12P40224 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cxcl12P40224 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cxcl12P40224 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cxcl12P40224 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cxcl12P40224 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cxcl12P40224 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cxcl12P40224 Gm11950-201ENSMUST00000121615 838 ntBASIC18.46■□□□□ 0.55
Cxcl12P40224 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Cxcl12P40224 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cxcl12P40224 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cxcl12P40224 Otx2os1-206ENSMUST00000228153 787 ntBASIC18.46■□□□□ 0.55
Cxcl12P40224 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cxcl12P40224 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cxcl12P40224 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cxcl12P40224 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cxcl12P40224 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cxcl12P40224 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cxcl12P40224 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Cxcl12P40224 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cxcl12P40224 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cxcl12P40224 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.45■□□□□ 0.54
Cxcl12P40224 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC18.45■□□□□ 0.54
Cxcl12P40224 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Cxcl12P40224 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC18.45■□□□□ 0.54
Cxcl12P40224 Gm18115-201ENSMUST00000221209 621 ntBASIC18.45■□□□□ 0.54
Cxcl12P40224 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cxcl12P40224 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Cxcl12P40224 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cxcl12P40224 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Cxcl12P40224 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
Cxcl12P40224 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cxcl12P40224 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cxcl12P40224 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cxcl12P40224 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cxcl12P40224 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Cxcl12P40224 Gm24841-201ENSMUST00000158676 357 ntBASIC18.44■□□□□ 0.54
Cxcl12P40224 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cxcl12P40224 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cxcl12P40224 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cxcl12P40224 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cxcl12P40224 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Cxcl12P40224 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cxcl12P40224 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cxcl12P40224 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cxcl12P40224 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
Cxcl12P40224 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cxcl12P40224 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Cxcl12P40224 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Cxcl12P40224 Gm27357-201ENSMUST00000183754 135 ntBASIC18.43■□□□□ 0.54
Cxcl12P40224 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cxcl12P40224 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cxcl12P40224 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cxcl12P40224 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cxcl12P40224 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cxcl12P40224 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.43■□□□□ 0.54
Cxcl12P40224 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cxcl12P40224 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Cxcl12P40224 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cxcl12P40224 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cxcl12P40224 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cxcl12P40224 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Cxcl12P40224 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
Cxcl12P40224 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cxcl12P40224 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
Cxcl12P40224 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cxcl12P40224 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
Cxcl12P40224 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cxcl12P40224 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC18.42■□□□□ 0.54
Cxcl12P40224 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC18.42■□□□□ 0.54
Cxcl12P40224 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC18.42■□□□□ 0.54
Cxcl12P40224 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC18.42■□□□□ 0.54
Cxcl12P40224 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cxcl12P40224 Spr-ps1-201ENSMUST00000089584 605 ntBASIC18.42■□□□□ 0.54
Cxcl12P40224 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.42■□□□□ 0.54
Cxcl12P40224 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Cxcl12P40224 Golph3-202ENSMUST00000226517 2359 ntBASIC18.42■□□□□ 0.54
Cxcl12P40224 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cxcl12P40224 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cxcl12P40224 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cxcl12P40224 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Cxcl12P40224 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cxcl12P40224 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cxcl12P40224 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cxcl12P40224 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Cxcl12P40224 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cxcl12P40224 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cxcl12P40224 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cxcl12P40224 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.41■□□□□ 0.54
Cxcl12P40224 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cxcl12P40224 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cxcl12P40224 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cxcl12P40224 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms