Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Rfc1P35601 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfc1P35601 Gm8493-201ENSMUST00000196881 489 ntBASIC18.84■□□□□ 0.61
Rfc1P35601 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rfc1P35601 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rfc1P35601 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Rfc1P35601 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfc1P35601 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfc1P35601 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Rfc1P35601 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfc1P35601 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfc1P35601 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rfc1P35601 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rfc1P35601 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rfc1P35601 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rfc1P35601 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Rfc1P35601 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rfc1P35601 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Rfc1P35601 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rfc1P35601 Gm37166-201ENSMUST00000195473 2474 ntBASIC18.83■□□□□ 0.6
Rfc1P35601 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rfc1P35601 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rfc1P35601 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Rfc1P35601 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rfc1P35601 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rfc1P35601 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Rfc1P35601 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rfc1P35601 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rfc1P35601 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rfc1P35601 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rfc1P35601 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rfc1P35601 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rfc1P35601 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.82■□□□□ 0.6
Rfc1P35601 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfc1P35601 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfc1P35601 Smad6-203ENSMUST00000179458 273 ntBASIC18.82■□□□□ 0.6
Rfc1P35601 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfc1P35601 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.82■□□□□ 0.6
Rfc1P35601 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.82■□□□□ 0.6
Rfc1P35601 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfc1P35601 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfc1P35601 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfc1P35601 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfc1P35601 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfc1P35601 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
Rfc1P35601 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfc1P35601 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfc1P35601 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfc1P35601 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfc1P35601 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfc1P35601 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfc1P35601 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfc1P35601 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfc1P35601 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Rfc1P35601 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.81■□□□□ 0.6
Rfc1P35601 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rfc1P35601 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rfc1P35601 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Rfc1P35601 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rfc1P35601 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rfc1P35601 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rfc1P35601 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rfc1P35601 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rfc1P35601 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rfc1P35601 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rfc1P35601 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rfc1P35601 Gm45417-201ENSMUST00000209533 758 ntBASIC18.81■□□□□ 0.6
Rfc1P35601 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rfc1P35601 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rfc1P35601 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rfc1P35601 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rfc1P35601 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rfc1P35601 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rfc1P35601 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rfc1P35601 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC18.8■□□□□ 0.6
Rfc1P35601 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.8■□□□□ 0.6
Rfc1P35601 Gm6139-201ENSMUST00000079261 882 ntBASIC18.8■□□□□ 0.6
Rfc1P35601 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.8■□□□□ 0.6
Rfc1P35601 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rfc1P35601 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rfc1P35601 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Rfc1P35601 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rfc1P35601 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rfc1P35601 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Rfc1P35601 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rfc1P35601 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rfc1P35601 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rfc1P35601 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rfc1P35601 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Rfc1P35601 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rfc1P35601 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rfc1P35601 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rfc1P35601 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rfc1P35601 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Rfc1P35601 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rfc1P35601 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Rfc1P35601 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC18.79■□□□□ 0.6
Rfc1P35601 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rfc1P35601 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rfc1P35601 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms