Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rom1P32958 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rom1P32958 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rom1P32958 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rom1P32958 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rom1P32958 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rom1P32958 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rom1P32958 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rom1P32958 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.19□□□□□ -0.14
Rom1P32958 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rom1P32958 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Rom1P32958 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rom1P32958 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.19□□□□□ -0.14
Rom1P32958 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rom1P32958 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rom1P32958 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC14.19□□□□□ -0.14
Rom1P32958 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC14.19□□□□□ -0.14
Rom1P32958 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Rom1P32958 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rom1P32958 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rom1P32958 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rom1P32958 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rom1P32958 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Rom1P32958 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rom1P32958 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rom1P32958 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rom1P32958 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Rom1P32958 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rom1P32958 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rom1P32958 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rom1P32958 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rom1P32958 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC14.18□□□□□ -0.14
Rom1P32958 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rom1P32958 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rom1P32958 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rom1P32958 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rom1P32958 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rom1P32958 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rom1P32958 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rom1P32958 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rom1P32958 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rom1P32958 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rom1P32958 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rom1P32958 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rom1P32958 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rom1P32958 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rom1P32958 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rom1P32958 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rom1P32958 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rom1P32958 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Rom1P32958 Gm10167-201ENSMUST00000150411 1479 ntBASIC14.17□□□□□ -0.14
Rom1P32958 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rom1P32958 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rom1P32958 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.17□□□□□ -0.14
Rom1P32958 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rom1P32958 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Rom1P32958 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rom1P32958 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rom1P32958 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rom1P32958 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rom1P32958 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rom1P32958 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rom1P32958 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC14.16□□□□□ -0.14
Rom1P32958 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Rom1P32958 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rom1P32958 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rom1P32958 Smad6-203ENSMUST00000179458 273 ntBASIC14.16□□□□□ -0.14
Rom1P32958 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Rom1P32958 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rom1P32958 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rom1P32958 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC14.16□□□□□ -0.14
Rom1P32958 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rom1P32958 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rom1P32958 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rom1P32958 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rom1P32958 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC14.15□□□□□ -0.14
Rom1P32958 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rom1P32958 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rom1P32958 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rom1P32958 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC14.15□□□□□ -0.14
Rom1P32958 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rom1P32958 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Rom1P32958 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rom1P32958 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rom1P32958 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rom1P32958 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rom1P32958 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rom1P32958 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rom1P32958 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC14.15□□□□□ -0.14
Rom1P32958 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rom1P32958 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC14.15□□□□□ -0.14
Rom1P32958 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rom1P32958 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rom1P32958 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rom1P32958 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rom1P32958 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rom1P32958 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rom1P32958 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Rom1P32958 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.15
Rom1P32958 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.15□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms