Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Slc6a1P31648 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Slc6a1P31648 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Slc6a1P31648 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Slc6a1P31648 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.38■□□□□ 0.05
Slc6a1P31648 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Slc6a1P31648 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Slc6a1P31648 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Slc6a1P31648 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Slc6a1P31648 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC15.38■□□□□ 0.05
Slc6a1P31648 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC15.38■□□□□ 0.05
Slc6a1P31648 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Slc6a1P31648 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Slc6a1P31648 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Slc6a1P31648 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.38■□□□□ 0.05
Slc6a1P31648 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Slc6a1P31648 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Slc6a1P31648 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Slc6a1P31648 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Slc6a1P31648 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Slc6a1P31648 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Slc6a1P31648 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Slc6a1P31648 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Slc6a1P31648 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Slc6a1P31648 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
Slc6a1P31648 Gm26833-201ENSMUST00000180899 440 ntBASIC15.37■□□□□ 0.05
Slc6a1P31648 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Slc6a1P31648 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Slc6a1P31648 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Slc6a1P31648 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Slc6a1P31648 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Slc6a1P31648 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Slc6a1P31648 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Slc6a1P31648 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Slc6a1P31648 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Slc6a1P31648 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15.36■□□□□ 0.05
Slc6a1P31648 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Slc6a1P31648 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC15.36■□□□□ 0.05
Slc6a1P31648 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Slc6a1P31648 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Slc6a1P31648 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Slc6a1P31648 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Slc6a1P31648 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Slc6a1P31648 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC15.36■□□□□ 0.05
Slc6a1P31648 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
Slc6a1P31648 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Slc6a1P31648 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Slc6a1P31648 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Slc6a1P31648 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Slc6a1P31648 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Slc6a1P31648 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.36■□□□□ 0.05
Slc6a1P31648 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Slc6a1P31648 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Slc6a1P31648 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Slc6a1P31648 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Slc6a1P31648 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Slc6a1P31648 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Slc6a1P31648 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.35■□□□□ 0.05
Slc6a1P31648 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Slc6a1P31648 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Slc6a1P31648 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Slc6a1P31648 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Slc6a1P31648 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Slc6a1P31648 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Slc6a1P31648 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Slc6a1P31648 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Slc6a1P31648 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC15.35■□□□□ 0.05
Slc6a1P31648 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Slc6a1P31648 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Slc6a1P31648 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Slc6a1P31648 Dancr-204ENSMUST00000132389 2347 ntBASIC15.35■□□□□ 0.05
Slc6a1P31648 Shroom3-211ENSMUST00000225438 5742 ntBASIC15.35■□□□□ 0.05
Slc6a1P31648 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Slc6a1P31648 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Slc6a1P31648 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a1P31648 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a1P31648 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a1P31648 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a1P31648 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Slc6a1P31648 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.34■□□□□ 0.05
Slc6a1P31648 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a1P31648 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
Slc6a1P31648 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a1P31648 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a1P31648 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a1P31648 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a1P31648 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a1P31648 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a1P31648 Gm12251-201ENSMUST00000117893 792 ntBASIC15.34■□□□□ 0.05
Slc6a1P31648 Cdc34b-202ENSMUST00000188741 1252 ntBASIC15.34■□□□□ 0.05
Slc6a1P31648 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a1P31648 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Slc6a1P31648 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a1P31648 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC15.34■□□□□ 0.05
Slc6a1P31648 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a1P31648 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Slc6a1P31648 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a1P31648 AC121961.1-201ENSMUST00000218594 1779 ntBASIC15.34■□□□□ 0.05
Slc6a1P31648 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a1P31648 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms