Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nckap1P28660 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.8■□□□□ 0.44
Nckap1P28660 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nckap1P28660 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nckap1P28660 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nckap1P28660 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nckap1P28660 Gm30025-201ENSMUST00000218555 728 ntBASIC17.8■□□□□ 0.44
Nckap1P28660 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.8■□□□□ 0.44
Nckap1P28660 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nckap1P28660 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nckap1P28660 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nckap1P28660 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.8■□□□□ 0.44
Nckap1P28660 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nckap1P28660 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nckap1P28660 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nckap1P28660 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nckap1P28660 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Nckap1P28660 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nckap1P28660 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nckap1P28660 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nckap1P28660 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.79■□□□□ 0.44
Nckap1P28660 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nckap1P28660 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Nckap1P28660 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nckap1P28660 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nckap1P28660 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.79■□□□□ 0.44
Nckap1P28660 Gm21814-202ENSMUST00000203277 873 ntBASIC17.79■□□□□ 0.44
Nckap1P28660 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nckap1P28660 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Nckap1P28660 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Nckap1P28660 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nckap1P28660 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nckap1P28660 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.79■□□□□ 0.44
Nckap1P28660 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nckap1P28660 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nckap1P28660 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nckap1P28660 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nckap1P28660 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nckap1P28660 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nckap1P28660 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.78■□□□□ 0.44
Nckap1P28660 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nckap1P28660 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nckap1P28660 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.78■□□□□ 0.44
Nckap1P28660 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nckap1P28660 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nckap1P28660 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Nckap1P28660 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Nckap1P28660 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nckap1P28660 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Nckap1P28660 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nckap1P28660 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nckap1P28660 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nckap1P28660 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Nckap1P28660 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Nckap1P28660 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nckap1P28660 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Nckap1P28660 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nckap1P28660 Gm6433-201ENSMUST00000118634 875 ntBASIC17.77■□□□□ 0.44
Nckap1P28660 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.77■□□□□ 0.44
Nckap1P28660 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nckap1P28660 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nckap1P28660 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Nckap1P28660 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.77■□□□□ 0.44
Nckap1P28660 Odf3b-204ENSMUST00000227834 930 ntBASIC17.77■□□□□ 0.44
Nckap1P28660 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nckap1P28660 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nckap1P28660 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.77■□□□□ 0.44
Nckap1P28660 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nckap1P28660 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Nckap1P28660 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nckap1P28660 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.76■□□□□ 0.43
Nckap1P28660 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nckap1P28660 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nckap1P28660 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nckap1P28660 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nckap1P28660 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nckap1P28660 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Nckap1P28660 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.76■□□□□ 0.43
Nckap1P28660 Gm43799-201ENSMUST00000201845 579 ntBASIC17.76■□□□□ 0.43
Nckap1P28660 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.76■□□□□ 0.43
Nckap1P28660 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nckap1P28660 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nckap1P28660 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nckap1P28660 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nckap1P28660 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nckap1P28660 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nckap1P28660 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nckap1P28660 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nckap1P28660 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nckap1P28660 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.75■□□□□ 0.43
Nckap1P28660 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nckap1P28660 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Nckap1P28660 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.75■□□□□ 0.43
Nckap1P28660 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.75■□□□□ 0.43
Nckap1P28660 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nckap1P28660 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nckap1P28660 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nckap1P28660 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nckap1P28660 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nckap1P28660 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms