Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col8a2P25318 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col8a2P25318 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col8a2P25318 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col8a2P25318 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col8a2P25318 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Col8a2P25318 Dmtn-207ENSMUST00000228001 2437 ntBASIC14.92□□□□□ -0.02
Col8a2P25318 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Col8a2P25318 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC14.92□□□□□ -0.02
Col8a2P25318 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Col8a2P25318 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC14.92□□□□□ -0.02
Col8a2P25318 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col8a2P25318 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col8a2P25318 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col8a2P25318 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col8a2P25318 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col8a2P25318 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col8a2P25318 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col8a2P25318 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col8a2P25318 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col8a2P25318 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col8a2P25318 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC14.91□□□□□ -0.02
Col8a2P25318 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC14.91□□□□□ -0.02
Col8a2P25318 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col8a2P25318 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Col8a2P25318 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col8a2P25318 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col8a2P25318 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col8a2P25318 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC14.91□□□□□ -0.02
Col8a2P25318 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC14.91□□□□□ -0.02
Col8a2P25318 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col8a2P25318 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col8a2P25318 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col8a2P25318 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Col8a2P25318 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col8a2P25318 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col8a2P25318 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col8a2P25318 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col8a2P25318 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col8a2P25318 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col8a2P25318 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col8a2P25318 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col8a2P25318 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Col8a2P25318 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col8a2P25318 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col8a2P25318 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Col8a2P25318 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC14.9□□□□□ -0.02
Col8a2P25318 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC14.9□□□□□ -0.02
Col8a2P25318 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC14.9□□□□□ -0.02
Col8a2P25318 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC14.9□□□□□ -0.02
Col8a2P25318 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
Col8a2P25318 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col8a2P25318 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col8a2P25318 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col8a2P25318 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col8a2P25318 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Col8a2P25318 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col8a2P25318 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col8a2P25318 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col8a2P25318 Gm37374-201ENSMUST00000194954 1829 ntBASIC14.89□□□□□ -0.03
Col8a2P25318 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC14.89□□□□□ -0.03
Col8a2P25318 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
Col8a2P25318 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Col8a2P25318 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col8a2P25318 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col8a2P25318 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col8a2P25318 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col8a2P25318 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Col8a2P25318 AC175538.1-201ENSMUST00000225343 1269 ntBASIC14.89□□□□□ -0.03
Col8a2P25318 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col8a2P25318 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col8a2P25318 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col8a2P25318 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Col8a2P25318 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col8a2P25318 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.89□□□□□ -0.03
Col8a2P25318 Gm42939-201ENSMUST00000197514 2205 ntBASIC14.89□□□□□ -0.03
Col8a2P25318 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col8a2P25318 Rarb-207ENSMUST00000225921 2756 ntBASIC14.89□□□□□ -0.03
Col8a2P25318 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col8a2P25318 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col8a2P25318 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col8a2P25318 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Col8a2P25318 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC14.88□□□□□ -0.03
Col8a2P25318 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col8a2P25318 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col8a2P25318 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col8a2P25318 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col8a2P25318 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col8a2P25318 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col8a2P25318 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col8a2P25318 Gm15565-201ENSMUST00000118890 427 ntBASIC14.88□□□□□ -0.03
Col8a2P25318 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Col8a2P25318 Gm6576-201ENSMUST00000169678 883 ntBASIC14.88□□□□□ -0.03
Col8a2P25318 Gm20472-201ENSMUST00000174403 1240 ntBASIC14.88□□□□□ -0.03
Col8a2P25318 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Col8a2P25318 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col8a2P25318 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col8a2P25318 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Col8a2P25318 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col8a2P25318 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms