Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cbx3P23198 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cbx3P23198 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC16.29■□□□□ 0.2
Cbx3P23198 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC16.29■□□□□ 0.2
Cbx3P23198 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cbx3P23198 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.29■□□□□ 0.2
Cbx3P23198 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Cbx3P23198 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cbx3P23198 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cbx3P23198 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cbx3P23198 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cbx3P23198 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cbx3P23198 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cbx3P23198 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Cbx3P23198 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cbx3P23198 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Cbx3P23198 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cbx3P23198 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Cbx3P23198 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cbx3P23198 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Cbx3P23198 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cbx3P23198 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cbx3P23198 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cbx3P23198 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cbx3P23198 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Cbx3P23198 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cbx3P23198 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC16.28■□□□□ 0.2
Cbx3P23198 Gm43530-201ENSMUST00000195920 274 ntBASIC16.28■□□□□ 0.2
Cbx3P23198 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cbx3P23198 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cbx3P23198 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.28■□□□□ 0.2
Cbx3P23198 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cbx3P23198 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cbx3P23198 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Cbx3P23198 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cbx3P23198 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cbx3P23198 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Cbx3P23198 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cbx3P23198 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Cbx3P23198 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cbx3P23198 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.27■□□□□ 0.2
Cbx3P23198 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cbx3P23198 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cbx3P23198 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cbx3P23198 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cbx3P23198 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC16.27■□□□□ 0.2
Cbx3P23198 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cbx3P23198 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cbx3P23198 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
Cbx3P23198 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cbx3P23198 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Cbx3P23198 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Cbx3P23198 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Cbx3P23198 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cbx3P23198 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cbx3P23198 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cbx3P23198 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cbx3P23198 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cbx3P23198 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cbx3P23198 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Cbx3P23198 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.26■□□□□ 0.19
Cbx3P23198 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC16.26■□□□□ 0.19
Cbx3P23198 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cbx3P23198 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC16.26■□□□□ 0.19
Cbx3P23198 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cbx3P23198 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cbx3P23198 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Cbx3P23198 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cbx3P23198 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cbx3P23198 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Cbx3P23198 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cbx3P23198 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cbx3P23198 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cbx3P23198 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
Cbx3P23198 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cbx3P23198 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cbx3P23198 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cbx3P23198 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cbx3P23198 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cbx3P23198 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cbx3P23198 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cbx3P23198 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cbx3P23198 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cbx3P23198 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cbx3P23198 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Cbx3P23198 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cbx3P23198 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cbx3P23198 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cbx3P23198 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Cbx3P23198 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cbx3P23198 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cbx3P23198 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cbx3P23198 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Cbx3P23198 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cbx3P23198 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cbx3P23198 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cbx3P23198 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.24■□□□□ 0.19
Cbx3P23198 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cbx3P23198 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cbx3P23198 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms