Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfrsf9P20334 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Tnfrsf9P20334 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfrsf9P20334 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfrsf9P20334 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfrsf9P20334 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfrsf9P20334 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfrsf9P20334 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfrsf9P20334 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfrsf9P20334 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfrsf9P20334 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfrsf9P20334 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC14.51□□□□□ -0.09
Tnfrsf9P20334 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfrsf9P20334 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfrsf9P20334 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfrsf9P20334 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfrsf9P20334 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfrsf9P20334 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Tnfrsf9P20334 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfrsf9P20334 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfrsf9P20334 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfrsf9P20334 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfrsf9P20334 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfrsf9P20334 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfrsf9P20334 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfrsf9P20334 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Tnfrsf9P20334 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Tnfrsf9P20334 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tnfrsf9P20334 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Tnfrsf9P20334 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tnfrsf9P20334 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Tnfrsf9P20334 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tnfrsf9P20334 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tnfrsf9P20334 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC14.5□□□□□ -0.09
Tnfrsf9P20334 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC14.5□□□□□ -0.09
Tnfrsf9P20334 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC14.5□□□□□ -0.09
Tnfrsf9P20334 Gm44549-201ENSMUST00000208351 577 ntBASIC14.5□□□□□ -0.09
Tnfrsf9P20334 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Tnfrsf9P20334 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tnfrsf9P20334 Gm10819-201ENSMUST00000099988 561 ntBASIC14.5□□□□□ -0.09
Tnfrsf9P20334 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tnfrsf9P20334 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tnfrsf9P20334 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tnfrsf9P20334 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tnfrsf9P20334 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tnfrsf9P20334 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tnfrsf9P20334 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Tnfrsf9P20334 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tnfrsf9P20334 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Tnfrsf9P20334 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Tnfrsf9P20334 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tnfrsf9P20334 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tnfrsf9P20334 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tnfrsf9P20334 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tnfrsf9P20334 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Tnfrsf9P20334 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tnfrsf9P20334 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tnfrsf9P20334 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tnfrsf9P20334 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tnfrsf9P20334 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC14.49□□□□□ -0.09
Tnfrsf9P20334 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Tnfrsf9P20334 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tnfrsf9P20334 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tnfrsf9P20334 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tnfrsf9P20334 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tnfrsf9P20334 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Tnfrsf9P20334 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Tnfrsf9P20334 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tnfrsf9P20334 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tnfrsf9P20334 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tnfrsf9P20334 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tnfrsf9P20334 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC14.48□□□□□ -0.09
Tnfrsf9P20334 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfrsf9P20334 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfrsf9P20334 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfrsf9P20334 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfrsf9P20334 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Tnfrsf9P20334 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfrsf9P20334 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfrsf9P20334 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfrsf9P20334 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Tnfrsf9P20334 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC14.48□□□□□ -0.09
Tnfrsf9P20334 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC14.48□□□□□ -0.09
Tnfrsf9P20334 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfrsf9P20334 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC14.48□□□□□ -0.09
Tnfrsf9P20334 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfrsf9P20334 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfrsf9P20334 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfrsf9P20334 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfrsf9P20334 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfrsf9P20334 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
Tnfrsf9P20334 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfrsf9P20334 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfrsf9P20334 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfrsf9P20334 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tnfrsf9P20334 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.47□□□□□ -0.09
Tnfrsf9P20334 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Tnfrsf9P20334 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Tnfrsf9P20334 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Tnfrsf9P20334 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms