Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hmgn1P18608 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Hmgn1P18608 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hmgn1P18608 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Hmgn1P18608 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.41■□□□□ 0.22
Hmgn1P18608 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC16.41■□□□□ 0.22
Hmgn1P18608 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.41■□□□□ 0.22
Hmgn1P18608 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Hmgn1P18608 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hmgn1P18608 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Hmgn1P18608 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Hmgn1P18608 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hmgn1P18608 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hmgn1P18608 Gm27454-201ENSMUST00000185090 204 ntBASIC16.4■□□□□ 0.22
Hmgn1P18608 Gm43060-201ENSMUST00000200621 289 ntBASIC16.4■□□□□ 0.22
Hmgn1P18608 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC16.4■□□□□ 0.22
Hmgn1P18608 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hmgn1P18608 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.4■□□□□ 0.22
Hmgn1P18608 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Hmgn1P18608 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hmgn1P18608 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hmgn1P18608 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hmgn1P18608 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Hmgn1P18608 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Hmgn1P18608 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.39■□□□□ 0.22
Hmgn1P18608 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hmgn1P18608 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.39■□□□□ 0.21
Hmgn1P18608 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hmgn1P18608 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hmgn1P18608 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.39■□□□□ 0.21
Hmgn1P18608 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Hmgn1P18608 Appbp2os-202ENSMUST00000206972 447 ntBASIC16.39■□□□□ 0.21
Hmgn1P18608 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hmgn1P18608 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hmgn1P18608 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Hmgn1P18608 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Hmgn1P18608 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hmgn1P18608 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hmgn1P18608 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.39■□□□□ 0.21
Hmgn1P18608 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Hmgn1P18608 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.38■□□□□ 0.21
Hmgn1P18608 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hmgn1P18608 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hmgn1P18608 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hmgn1P18608 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Hmgn1P18608 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hmgn1P18608 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hmgn1P18608 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC16.38■□□□□ 0.21
Hmgn1P18608 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC16.38■□□□□ 0.21
Hmgn1P18608 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hmgn1P18608 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Hmgn1P18608 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hmgn1P18608 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hmgn1P18608 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hmgn1P18608 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hmgn1P18608 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hmgn1P18608 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.38■□□□□ 0.21
Hmgn1P18608 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Hmgn1P18608 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hmgn1P18608 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Hmgn1P18608 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Hmgn1P18608 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Hmgn1P18608 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.37■□□□□ 0.21
Hmgn1P18608 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Hmgn1P18608 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Hmgn1P18608 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Hmgn1P18608 Gm43017-201ENSMUST00000198296 752 ntBASIC16.37■□□□□ 0.21
Hmgn1P18608 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hmgn1P18608 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Hmgn1P18608 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hmgn1P18608 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hmgn1P18608 Idnk-204ENSMUST00000226010 1898 ntBASIC16.37■□□□□ 0.21
Hmgn1P18608 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hmgn1P18608 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hmgn1P18608 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hmgn1P18608 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hmgn1P18608 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hmgn1P18608 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hmgn1P18608 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.36■□□□□ 0.21
Hmgn1P18608 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Hmgn1P18608 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Hmgn1P18608 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.36■□□□□ 0.21
Hmgn1P18608 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Hmgn1P18608 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hmgn1P18608 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hmgn1P18608 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.36■□□□□ 0.21
Hmgn1P18608 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.36■□□□□ 0.21
Hmgn1P18608 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hmgn1P18608 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC16.36■□□□□ 0.21
Hmgn1P18608 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Hmgn1P18608 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hmgn1P18608 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hmgn1P18608 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hmgn1P18608 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hmgn1P18608 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hmgn1P18608 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hmgn1P18608 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hmgn1P18608 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.35■□□□□ 0.21
Hmgn1P18608 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hmgn1P18608 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms