Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.2■□□□□ 0.5
Rb1P13405 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rb1P13405 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.2■□□□□ 0.5
Rb1P13405 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Rb1P13405 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.2■□□□□ 0.5
Rb1P13405 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.2■□□□□ 0.5
Rb1P13405 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rb1P13405 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Rb1P13405 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rb1P13405 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rb1P13405 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rb1P13405 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.19■□□□□ 0.5
Rb1P13405 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rb1P13405 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rb1P13405 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rb1P13405 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.19■□□□□ 0.5
Rb1P13405 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rb1P13405 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rb1P13405 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rb1P13405 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rb1P13405 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rb1P13405 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rb1P13405 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rb1P13405 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Rb1P13405 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rb1P13405 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rb1P13405 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.18■□□□□ 0.5
Rb1P13405 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.18■□□□□ 0.5
Rb1P13405 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.18■□□□□ 0.5
Rb1P13405 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Rb1P13405 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rb1P13405 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.18■□□□□ 0.5
Rb1P13405 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.18■□□□□ 0.5
Rb1P13405 Gm37055-201ENSMUST00000191866 133 ntBASIC18.18■□□□□ 0.5
Rb1P13405 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.18■□□□□ 0.5
Rb1P13405 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.18■□□□□ 0.5
Rb1P13405 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rb1P13405 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rb1P13405 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rb1P13405 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rb1P13405 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rb1P13405 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rb1P13405 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rb1P13405 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rb1P13405 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Rb1P13405 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rb1P13405 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rb1P13405 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.17■□□□□ 0.5
Rb1P13405 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Rb1P13405 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rb1P13405 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Rb1P13405 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rb1P13405 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rb1P13405 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rb1P13405 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rb1P13405 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rb1P13405 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rb1P13405 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rb1P13405 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rb1P13405 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Rb1P13405 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rb1P13405 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rb1P13405 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rb1P13405 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.16■□□□□ 0.5
Rb1P13405 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rb1P13405 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.16■□□□□ 0.5
Rb1P13405 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Rb1P13405 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rb1P13405 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rb1P13405 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rb1P13405 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rb1P13405 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rb1P13405 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Rb1P13405 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rb1P13405 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
Rb1P13405 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rb1P13405 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rb1P13405 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
Rb1P13405 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Rb1P13405 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rb1P13405 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.15■□□□□ 0.5
Rb1P13405 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rb1P13405 Gm37812-201ENSMUST00000195216 2475 ntBASIC18.14■□□□□ 0.5
Rb1P13405 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rb1P13405 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rb1P13405 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Rb1P13405 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Rb1P13405 Gm15565-201ENSMUST00000118890 427 ntBASIC18.14■□□□□ 0.49
Rb1P13405 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.14■□□□□ 0.49
Rb1P13405 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rb1P13405 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rb1P13405 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.14■□□□□ 0.49
Rb1P13405 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rb1P13405 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.14■□□□□ 0.49
Rb1P13405 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rb1P13405 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rb1P13405 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rb1P13405 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rb1P13405 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Rb1P13405 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms