Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cntn1P12960 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.12■□□□□ 0.33
Cntn1P12960 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.12■□□□□ 0.33
Cntn1P12960 Gm43183-201ENSMUST00000200632 547 ntBASIC17.12■□□□□ 0.33
Cntn1P12960 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cntn1P12960 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cntn1P12960 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cntn1P12960 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.12■□□□□ 0.33
Cntn1P12960 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cntn1P12960 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Cntn1P12960 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cntn1P12960 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cntn1P12960 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.12■□□□□ 0.33
Cntn1P12960 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Cntn1P12960 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.11■□□□□ 0.33
Cntn1P12960 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cntn1P12960 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cntn1P12960 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Cntn1P12960 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cntn1P12960 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
Cntn1P12960 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cntn1P12960 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cntn1P12960 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cntn1P12960 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cntn1P12960 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.11■□□□□ 0.33
Cntn1P12960 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.11■□□□□ 0.33
Cntn1P12960 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.11■□□□□ 0.33
Cntn1P12960 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Cntn1P12960 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.11■□□□□ 0.33
Cntn1P12960 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cntn1P12960 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cntn1P12960 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cntn1P12960 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cntn1P12960 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cntn1P12960 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.11■□□□□ 0.33
Cntn1P12960 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cntn1P12960 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cntn1P12960 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Cntn1P12960 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cntn1P12960 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Cntn1P12960 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cntn1P12960 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
Cntn1P12960 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.1■□□□□ 0.33
Cntn1P12960 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.1■□□□□ 0.33
Cntn1P12960 Gm715-201ENSMUST00000117865 831 ntBASIC17.1■□□□□ 0.33
Cntn1P12960 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cntn1P12960 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Cntn1P12960 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cntn1P12960 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cntn1P12960 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cntn1P12960 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cntn1P12960 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cntn1P12960 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cntn1P12960 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cntn1P12960 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cntn1P12960 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cntn1P12960 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cntn1P12960 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
Cntn1P12960 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cntn1P12960 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cntn1P12960 Grk6-206ENSMUST00000224995 2971 ntBASIC17.09■□□□□ 0.33
Cntn1P12960 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Cntn1P12960 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cntn1P12960 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.09■□□□□ 0.33
Cntn1P12960 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.09■□□□□ 0.33
Cntn1P12960 Mir6349-201ENSMUST00000184059 97 ntBASIC17.09■□□□□ 0.33
Cntn1P12960 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cntn1P12960 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cntn1P12960 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.09■□□□□ 0.33
Cntn1P12960 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cntn1P12960 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Cntn1P12960 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Cntn1P12960 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
Cntn1P12960 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cntn1P12960 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cntn1P12960 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cntn1P12960 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cntn1P12960 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.08■□□□□ 0.33
Cntn1P12960 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cntn1P12960 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.08■□□□□ 0.32
Cntn1P12960 Gm37292-201ENSMUST00000192062 758 ntBASIC17.08■□□□□ 0.32
Cntn1P12960 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Cntn1P12960 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.08■□□□□ 0.32
Cntn1P12960 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Cntn1P12960 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cntn1P12960 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cntn1P12960 Rarb-207ENSMUST00000225921 2756 ntBASIC17.07■□□□□ 0.32
Cntn1P12960 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cntn1P12960 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cntn1P12960 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cntn1P12960 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.07■□□□□ 0.32
Cntn1P12960 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cntn1P12960 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.07■□□□□ 0.32
Cntn1P12960 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cntn1P12960 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.07■□□□□ 0.32
Cntn1P12960 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cntn1P12960 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cntn1P12960 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cntn1P12960 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cntn1P12960 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms