Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ccl3P10855 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccl3P10855 Gm7856-201ENSMUST00000117514 1493 ntBASIC15.83■□□□□ 0.12
Ccl3P10855 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccl3P10855 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccl3P10855 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Ccl3P10855 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC15.83■□□□□ 0.12
Ccl3P10855 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccl3P10855 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccl3P10855 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccl3P10855 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Ccl3P10855 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccl3P10855 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccl3P10855 Gm4217-201ENSMUST00000182243 1002 ntBASIC15.82■□□□□ 0.12
Ccl3P10855 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC15.82■□□□□ 0.12
Ccl3P10855 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ccl3P10855 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccl3P10855 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccl3P10855 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccl3P10855 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Ccl3P10855 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ccl3P10855 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccl3P10855 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccl3P10855 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccl3P10855 Gm38308-201ENSMUST00000194934 1809 ntBASIC15.82■□□□□ 0.12
Ccl3P10855 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccl3P10855 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccl3P10855 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccl3P10855 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccl3P10855 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Ccl3P10855 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC15.81■□□□□ 0.12
Ccl3P10855 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccl3P10855 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ccl3P10855 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccl3P10855 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Ccl3P10855 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC15.81■□□□□ 0.12
Ccl3P10855 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccl3P10855 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccl3P10855 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccl3P10855 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccl3P10855 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Ccl3P10855 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccl3P10855 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccl3P10855 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccl3P10855 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccl3P10855 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Ccl3P10855 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccl3P10855 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ccl3P10855 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ccl3P10855 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ccl3P10855 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Ccl3P10855 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccl3P10855 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccl3P10855 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Ccl3P10855 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccl3P10855 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Ccl3P10855 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC15.8■□□□□ 0.12
Ccl3P10855 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccl3P10855 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccl3P10855 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC15.8■□□□□ 0.12
Ccl3P10855 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccl3P10855 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
Ccl3P10855 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccl3P10855 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC15.8■□□□□ 0.12
Ccl3P10855 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccl3P10855 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ccl3P10855 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC15.8■□□□□ 0.12
Ccl3P10855 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccl3P10855 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ccl3P10855 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccl3P10855 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccl3P10855 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Ccl3P10855 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC15.79■□□□□ 0.12
Ccl3P10855 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccl3P10855 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccl3P10855 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Ccl3P10855 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Ccl3P10855 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ccl3P10855 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC15.79■□□□□ 0.12
Ccl3P10855 Gm16061-201ENSMUST00000122167 857 ntBASIC15.79■□□□□ 0.12
Ccl3P10855 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC15.79■□□□□ 0.12
Ccl3P10855 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC15.79■□□□□ 0.12
Ccl3P10855 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC15.79■□□□□ 0.12
Ccl3P10855 Gm27741-201ENSMUST00000185060 237 ntBASIC15.79■□□□□ 0.12
Ccl3P10855 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Ccl3P10855 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Ccl3P10855 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Ccl3P10855 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Ccl3P10855 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccl3P10855 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccl3P10855 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ccl3P10855 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccl3P10855 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Ccl3P10855 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ccl3P10855 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ccl3P10855 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ccl3P10855 BC021767-201ENSMUST00000126387 1716 ntBASIC15.78■□□□□ 0.12
Ccl3P10855 Gm14859-201ENSMUST00000117752 357 ntBASIC15.78■□□□□ 0.12
Ccl3P10855 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC15.78■□□□□ 0.12
Ccl3P10855 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms