Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
PtcraP0C6B2 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PtcraP0C6B2 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC15.53■□□□□ 0.08
PtcraP0C6B2 Mir2861-201ENSMUST00000175539 82 ntBASIC15.53■□□□□ 0.08
PtcraP0C6B2 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC15.53■□□□□ 0.08
PtcraP0C6B2 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PtcraP0C6B2 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PtcraP0C6B2 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
PtcraP0C6B2 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PtcraP0C6B2 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
PtcraP0C6B2 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PtcraP0C6B2 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PtcraP0C6B2 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PtcraP0C6B2 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
PtcraP0C6B2 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC15.52■□□□□ 0.08
PtcraP0C6B2 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PtcraP0C6B2 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PtcraP0C6B2 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
PtcraP0C6B2 Gm11249-201ENSMUST00000117071 859 ntBASIC15.52■□□□□ 0.08
PtcraP0C6B2 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PtcraP0C6B2 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC15.52■□□□□ 0.08
PtcraP0C6B2 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PtcraP0C6B2 AC108858.1-201ENSMUST00000228461 1498 ntBASIC15.52■□□□□ 0.07
PtcraP0C6B2 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
PtcraP0C6B2 Grk6-206ENSMUST00000224995 2971 ntBASIC15.51■□□□□ 0.07
PtcraP0C6B2 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PtcraP0C6B2 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PtcraP0C6B2 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC15.51■□□□□ 0.07
PtcraP0C6B2 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
PtcraP0C6B2 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PtcraP0C6B2 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC15.51■□□□□ 0.07
PtcraP0C6B2 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
PtcraP0C6B2 AC163280.1-201ENSMUST00000228194 1100 ntBASIC15.51■□□□□ 0.07
PtcraP0C6B2 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PtcraP0C6B2 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PtcraP0C6B2 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
PtcraP0C6B2 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PtcraP0C6B2 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PtcraP0C6B2 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PtcraP0C6B2 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
PtcraP0C6B2 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PtcraP0C6B2 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PtcraP0C6B2 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PtcraP0C6B2 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PtcraP0C6B2 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PtcraP0C6B2 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PtcraP0C6B2 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PtcraP0C6B2 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PtcraP0C6B2 Gm13158-201ENSMUST00000122007 736 ntBASIC15.5■□□□□ 0.07
PtcraP0C6B2 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PtcraP0C6B2 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PtcraP0C6B2 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PtcraP0C6B2 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PtcraP0C6B2 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PtcraP0C6B2 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PtcraP0C6B2 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PtcraP0C6B2 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PtcraP0C6B2 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PtcraP0C6B2 Gm5953-201ENSMUST00000220644 2616 ntBASIC15.49■□□□□ 0.07
PtcraP0C6B2 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PtcraP0C6B2 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PtcraP0C6B2 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC15.49■□□□□ 0.07
PtcraP0C6B2 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PtcraP0C6B2 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PtcraP0C6B2 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
PtcraP0C6B2 Gm11643-201ENSMUST00000119578 864 ntBASIC15.49■□□□□ 0.07
PtcraP0C6B2 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC15.49■□□□□ 0.07
PtcraP0C6B2 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PtcraP0C6B2 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PtcraP0C6B2 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PtcraP0C6B2 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC15.49■□□□□ 0.07
PtcraP0C6B2 Fst-202ENSMUST00000223640 2612 ntBASIC15.49■□□□□ 0.07
PtcraP0C6B2 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PtcraP0C6B2 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PtcraP0C6B2 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PtcraP0C6B2 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
PtcraP0C6B2 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
PtcraP0C6B2 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
PtcraP0C6B2 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PtcraP0C6B2 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PtcraP0C6B2 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PtcraP0C6B2 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PtcraP0C6B2 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PtcraP0C6B2 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
PtcraP0C6B2 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PtcraP0C6B2 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PtcraP0C6B2 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
PtcraP0C6B2 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PtcraP0C6B2 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PtcraP0C6B2 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
PtcraP0C6B2 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PtcraP0C6B2 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PtcraP0C6B2 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC15.48■□□□□ 0.07
PtcraP0C6B2 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
PtcraP0C6B2 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC15.48■□□□□ 0.07
PtcraP0C6B2 Gm12527-201ENSMUST00000117967 564 ntBASIC15.48■□□□□ 0.07
PtcraP0C6B2 Gm15375-201ENSMUST00000119510 849 ntBASIC15.48■□□□□ 0.07
PtcraP0C6B2 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC15.48■□□□□ 0.07
PtcraP0C6B2 Alkbh1-212ENSMUST00000185301 408 ntBASIC15.48■□□□□ 0.07
PtcraP0C6B2 Gm18666-201ENSMUST00000190039 958 ntBASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms