Protein–RNA interactions for Protein: P07903

Ercc1, DNA excision repair protein ERCC-1, mousemouse

Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1P07903 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ercc1P07903 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ercc1P07903 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ercc1P07903 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ercc1P07903 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Ercc1P07903 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC14.97□□□□□ -0.01
Ercc1P07903 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ercc1P07903 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ercc1P07903 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ercc1P07903 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ercc1P07903 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ercc1P07903 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.97□□□□□ -0.01
Ercc1P07903 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.97□□□□□ -0.01
Ercc1P07903 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Ercc1P07903 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ercc1P07903 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ercc1P07903 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Ercc1P07903 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
Ercc1P07903 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ercc1P07903 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ercc1P07903 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ercc1P07903 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ercc1P07903 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ercc1P07903 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ercc1P07903 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ercc1P07903 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ercc1P07903 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ercc1P07903 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC14.96□□□□□ -0.01
Ercc1P07903 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC14.96□□□□□ -0.01
Ercc1P07903 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ercc1P07903 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC14.96□□□□□ -0.01
Ercc1P07903 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC14.96□□□□□ -0.01
Ercc1P07903 Wdr70-203ENSMUST00000227371 1130 ntBASIC14.96□□□□□ -0.01
Ercc1P07903 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ercc1P07903 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ercc1P07903 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ercc1P07903 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ercc1P07903 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ercc1P07903 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ercc1P07903 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ercc1P07903 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ercc1P07903 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Ercc1P07903 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Ercc1P07903 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ercc1P07903 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Ercc1P07903 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ercc1P07903 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.95□□□□□ -0.02
Ercc1P07903 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ercc1P07903 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ercc1P07903 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ercc1P07903 Tgds-204ENSMUST00000228543 1594 ntBASIC14.95□□□□□ -0.02
Ercc1P07903 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ercc1P07903 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ercc1P07903 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ercc1P07903 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ercc1P07903 Gm27801-201ENSMUST00000184174 223 ntBASIC14.95□□□□□ -0.02
Ercc1P07903 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Ercc1P07903 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ercc1P07903 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Ercc1P07903 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ercc1P07903 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ercc1P07903 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ercc1P07903 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
Ercc1P07903 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ercc1P07903 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ercc1P07903 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ercc1P07903 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
Ercc1P07903 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ercc1P07903 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ercc1P07903 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ercc1P07903 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
Ercc1P07903 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ercc1P07903 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Ercc1P07903 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ercc1P07903 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ercc1P07903 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
Ercc1P07903 Gm19094-201ENSMUST00000209791 1246 ntBASIC14.94□□□□□ -0.02
Ercc1P07903 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ercc1P07903 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC14.94□□□□□ -0.02
Ercc1P07903 AC107452.1-201ENSMUST00000227963 481 ntBASIC14.94□□□□□ -0.02
Ercc1P07903 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ercc1P07903 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ercc1P07903 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ercc1P07903 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ercc1P07903 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ercc1P07903 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ercc1P07903 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ercc1P07903 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ercc1P07903 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ercc1P07903 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ercc1P07903 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ercc1P07903 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ercc1P07903 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ercc1P07903 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ercc1P07903 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ercc1P07903 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ercc1P07903 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ercc1P07903 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ercc1P07903 Gm11421-201ENSMUST00000122124 294 ntBASIC14.93□□□□□ -0.02
Ercc1P07903 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms