Protein–RNA interactions for Protein: P06336

Ig epsilon chain C region, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06336 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.5■□□□□ 0.23
P06336 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
P06336 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
P06336 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.5■□□□□ 0.23
P06336 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.5■□□□□ 0.23
P06336 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.5■□□□□ 0.23
P06336 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
P06336 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
P06336 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
P06336 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
P06336 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
P06336 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
P06336 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
P06336 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
P06336 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
P06336 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
P06336 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.49■□□□□ 0.23
P06336 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
P06336 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
P06336 Gm20760-201ENSMUST00000179197 648 ntBASIC16.49■□□□□ 0.23
P06336 Gm27011-201ENSMUST00000182352 972 ntBASIC16.49■□□□□ 0.23
P06336 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
P06336 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
P06336 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
P06336 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
P06336 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
P06336 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
P06336 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
P06336 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.48■□□□□ 0.23
P06336 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
P06336 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
P06336 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
P06336 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
P06336 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
P06336 Gm13158-201ENSMUST00000122007 736 ntBASIC16.48■□□□□ 0.23
P06336 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.48■□□□□ 0.23
P06336 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.48■□□□□ 0.23
P06336 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
P06336 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
P06336 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
P06336 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
P06336 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
P06336 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
P06336 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
P06336 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
P06336 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
P06336 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
P06336 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
P06336 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
P06336 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
P06336 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
P06336 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
P06336 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.47■□□□□ 0.23
P06336 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
P06336 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.47■□□□□ 0.23
P06336 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
P06336 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
P06336 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
P06336 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
P06336 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
P06336 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
P06336 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.46■□□□□ 0.23
P06336 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
P06336 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
P06336 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
P06336 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
P06336 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
P06336 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
P06336 Gm18666-201ENSMUST00000190039 958 ntBASIC16.46■□□□□ 0.23
P06336 Gm10138-203ENSMUST00000206952 366 ntBASIC16.46■□□□□ 0.23
P06336 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
P06336 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
P06336 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
P06336 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
P06336 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
P06336 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
P06336 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
P06336 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.46■□□□□ 0.23
P06336 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
P06336 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
P06336 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.46■□□□□ 0.22
P06336 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
P06336 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
P06336 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.45■□□□□ 0.22
P06336 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
P06336 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
P06336 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
P06336 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
P06336 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
P06336 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.45■□□□□ 0.22
P06336 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
P06336 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
P06336 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.45■□□□□ 0.22
P06336 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
P06336 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
P06336 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
P06336 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
P06336 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
P06336 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
P06336 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 72.1 ms