Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PdgfrbP05622 Gm38285-201ENSMUST00000192928 922 ntBASIC18.07■□□□□ 0.48
PdgfrbP05622 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PdgfrbP05622 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PdgfrbP05622 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PdgfrbP05622 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.07■□□□□ 0.48
PdgfrbP05622 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PdgfrbP05622 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
PdgfrbP05622 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PdgfrbP05622 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PdgfrbP05622 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PdgfrbP05622 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PdgfrbP05622 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
PdgfrbP05622 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PdgfrbP05622 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PdgfrbP05622 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PdgfrbP05622 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PdgfrbP05622 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PdgfrbP05622 Zfp783-201ENSMUST00000095946 670 ntBASIC18.06■□□□□ 0.48
PdgfrbP05622 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PdgfrbP05622 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PdgfrbP05622 Flg-201ENSMUST00000050758 1488 ntBASIC18.06■□□□□ 0.48
PdgfrbP05622 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PdgfrbP05622 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PdgfrbP05622 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
PdgfrbP05622 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.05■□□□□ 0.48
PdgfrbP05622 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PdgfrbP05622 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PdgfrbP05622 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.05■□□□□ 0.48
PdgfrbP05622 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PdgfrbP05622 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PdgfrbP05622 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.05■□□□□ 0.48
PdgfrbP05622 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.05■□□□□ 0.48
PdgfrbP05622 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PdgfrbP05622 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
PdgfrbP05622 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PdgfrbP05622 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.05■□□□□ 0.48
PdgfrbP05622 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PdgfrbP05622 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.05■□□□□ 0.48
PdgfrbP05622 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PdgfrbP05622 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.05■□□□□ 0.48
PdgfrbP05622 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
PdgfrbP05622 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.05■□□□□ 0.48
PdgfrbP05622 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PdgfrbP05622 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PdgfrbP05622 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
PdgfrbP05622 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.04■□□□□ 0.48
PdgfrbP05622 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PdgfrbP05622 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PdgfrbP05622 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PdgfrbP05622 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.04■□□□□ 0.48
PdgfrbP05622 Gm12896-201ENSMUST00000118430 226 ntBASIC18.04■□□□□ 0.48
PdgfrbP05622 Gm11927-201ENSMUST00000118472 759 ntBASIC18.04■□□□□ 0.48
PdgfrbP05622 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PdgfrbP05622 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PdgfrbP05622 Gm2559-201ENSMUST00000201323 363 ntBASIC18.04■□□□□ 0.48
PdgfrbP05622 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PdgfrbP05622 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
PdgfrbP05622 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PdgfrbP05622 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PdgfrbP05622 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PdgfrbP05622 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PdgfrbP05622 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PdgfrbP05622 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.03■□□□□ 0.48
PdgfrbP05622 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PdgfrbP05622 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PdgfrbP05622 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PdgfrbP05622 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.03■□□□□ 0.48
PdgfrbP05622 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PdgfrbP05622 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.03■□□□□ 0.48
PdgfrbP05622 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PdgfrbP05622 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PdgfrbP05622 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PdgfrbP05622 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PdgfrbP05622 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
PdgfrbP05622 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.02■□□□□ 0.48
PdgfrbP05622 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.02■□□□□ 0.48
PdgfrbP05622 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.02■□□□□ 0.48
PdgfrbP05622 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.02■□□□□ 0.48
PdgfrbP05622 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PdgfrbP05622 Mtag2-201ENSMUST00000058665 714 ntBASIC18.02■□□□□ 0.48
PdgfrbP05622 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PdgfrbP05622 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PdgfrbP05622 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PdgfrbP05622 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
PdgfrbP05622 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.02■□□□□ 0.47
PdgfrbP05622 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
PdgfrbP05622 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PdgfrbP05622 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
PdgfrbP05622 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PdgfrbP05622 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.01■□□□□ 0.47
PdgfrbP05622 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PdgfrbP05622 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PdgfrbP05622 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PdgfrbP05622 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PdgfrbP05622 Gm12441-201ENSMUST00000121806 588 ntBASIC18.01■□□□□ 0.47
PdgfrbP05622 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.01■□□□□ 0.47
PdgfrbP05622 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.01■□□□□ 0.47
PdgfrbP05622 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
PdgfrbP05622 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms