Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P04224 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
P04224 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P04224 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P04224 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
P04224 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
P04224 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
P04224 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P04224 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
P04224 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P04224 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
P04224 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P04224 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
P04224 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
P04224 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
P04224 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P04224 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
P04224 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC15.68■□□□□ 0.1
P04224 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC15.68■□□□□ 0.1
P04224 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P04224 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P04224 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P04224 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P04224 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
P04224 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
P04224 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
P04224 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P04224 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P04224 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
P04224 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P04224 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
P04224 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
P04224 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
P04224 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
P04224 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
P04224 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.67■□□□□ 0.1
P04224 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
P04224 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC15.67■□□□□ 0.1
P04224 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
P04224 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
P04224 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
P04224 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
P04224 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
P04224 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
P04224 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
P04224 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
P04224 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
P04224 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
P04224 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
P04224 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
P04224 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
P04224 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
P04224 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
P04224 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
P04224 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
P04224 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
P04224 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
P04224 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
P04224 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.66■□□□□ 0.1
P04224 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
P04224 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
P04224 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
P04224 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
P04224 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
P04224 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
P04224 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
P04224 AC165080.2-201ENSMUST00000217491 1530 ntBASIC15.65■□□□□ 0.1
P04224 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
P04224 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
P04224 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC15.65■□□□□ 0.1
P04224 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC15.65■□□□□ 0.1
P04224 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
P04224 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
P04224 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
P04224 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
P04224 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
P04224 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
P04224 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
P04224 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
P04224 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
P04224 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
P04224 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
P04224 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
P04224 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
P04224 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
P04224 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.64■□□□□ 0.09
P04224 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC15.64■□□□□ 0.09
P04224 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
P04224 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
P04224 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
P04224 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
P04224 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
P04224 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
P04224 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
P04224 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC15.64■□□□□ 0.09
P04224 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
P04224 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
P04224 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.64■□□□□ 0.09
P04224 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
P04224 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms