Protein–RNA interactions for Protein: P04214

T-cell receptor beta chain V region E1, mousemouse

Predictions only

Length 136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04214 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.81■□□□□ 0.6
P04214 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
P04214 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
P04214 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
P04214 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.81■□□□□ 0.6
P04214 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
P04214 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
P04214 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
P04214 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
P04214 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
P04214 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC18.8■□□□□ 0.6
P04214 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
P04214 Gm17808-201ENSMUST00000200859 894 ntBASIC18.8■□□□□ 0.6
P04214 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
P04214 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
P04214 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
P04214 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
P04214 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
P04214 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
P04214 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
P04214 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.79■□□□□ 0.6
P04214 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
P04214 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
P04214 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
P04214 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
P04214 Gm13401-201ENSMUST00000117074 291 ntBASIC18.79■□□□□ 0.6
P04214 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
P04214 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
P04214 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
P04214 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
P04214 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
P04214 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
P04214 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
P04214 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
P04214 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
P04214 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
P04214 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC18.78■□□□□ 0.6
P04214 Gm18669-201ENSMUST00000216049 778 ntBASIC18.78■□□□□ 0.6
P04214 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
P04214 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
P04214 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
P04214 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
P04214 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
P04214 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
P04214 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
P04214 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
P04214 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
P04214 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.77■□□□□ 0.6
P04214 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.77■□□□□ 0.6
P04214 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
P04214 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
P04214 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
P04214 Gm10418-201ENSMUST00000100943 576 ntBASIC18.77■□□□□ 0.6
P04214 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.77■□□□□ 0.6
P04214 Gm7213-201ENSMUST00000215977 950 ntBASIC18.77■□□□□ 0.6
P04214 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
P04214 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
P04214 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
P04214 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.77■□□□□ 0.6
P04214 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
P04214 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
P04214 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
P04214 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
P04214 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
P04214 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
P04214 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
P04214 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
P04214 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
P04214 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
P04214 Gm7153-201ENSMUST00000117092 455 ntBASIC18.76■□□□□ 0.59
P04214 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
P04214 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
P04214 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.76■□□□□ 0.59
P04214 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC18.76■□□□□ 0.59
P04214 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
P04214 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
P04214 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
P04214 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
P04214 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.75■□□□□ 0.59
P04214 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
P04214 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
P04214 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.75■□□□□ 0.59
P04214 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
P04214 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.75■□□□□ 0.59
P04214 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
P04214 Umpk-ps-201ENSMUST00000211897 827 ntBASIC18.75■□□□□ 0.59
P04214 AC133598.3-202ENSMUST00000224219 531 ntBASIC18.75■□□□□ 0.59
P04214 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
P04214 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
P04214 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
P04214 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
P04214 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.75■□□□□ 0.59
P04214 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
P04214 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
P04214 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
P04214 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
P04214 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
P04214 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC18.74■□□□□ 0.59
P04214 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
P04214 Il3ra-202ENSMUST00000223589 738 ntBASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms