Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hoxa3P02831 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Hoxa3P02831 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hoxa3P02831 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hoxa3P02831 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hoxa3P02831 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC14.98□□□□□ -0.01
Hoxa3P02831 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hoxa3P02831 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hoxa3P02831 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hoxa3P02831 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hoxa3P02831 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hoxa3P02831 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC14.97□□□□□ -0.01
Hoxa3P02831 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Hoxa3P02831 H2-K2-201ENSMUST00000174250 1049 ntBASIC14.97□□□□□ -0.01
Hoxa3P02831 Alkbh1-212ENSMUST00000185301 408 ntBASIC14.97□□□□□ -0.01
Hoxa3P02831 Gm37805-201ENSMUST00000192612 1094 ntBASIC14.97□□□□□ -0.01
Hoxa3P02831 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC14.97□□□□□ -0.01
Hoxa3P02831 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Hoxa3P02831 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Hoxa3P02831 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Hoxa3P02831 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hoxa3P02831 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hoxa3P02831 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hoxa3P02831 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hoxa3P02831 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hoxa3P02831 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hoxa3P02831 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Hoxa3P02831 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Hoxa3P02831 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Hoxa3P02831 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hoxa3P02831 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hoxa3P02831 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hoxa3P02831 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hoxa3P02831 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hoxa3P02831 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Hoxa3P02831 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC14.96□□□□□ -0.01
Hoxa3P02831 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Hoxa3P02831 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Hoxa3P02831 AC153881.1-201ENSMUST00000214448 284 ntBASIC14.96□□□□□ -0.01
Hoxa3P02831 AC107452.1-201ENSMUST00000227963 481 ntBASIC14.96□□□□□ -0.01
Hoxa3P02831 Mtag2-201ENSMUST00000058665 714 ntBASIC14.96□□□□□ -0.01
Hoxa3P02831 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hoxa3P02831 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hoxa3P02831 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.02
Hoxa3P02831 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Hoxa3P02831 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
Hoxa3P02831 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Hoxa3P02831 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.02
Hoxa3P02831 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Hoxa3P02831 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hoxa3P02831 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hoxa3P02831 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC14.95□□□□□ -0.02
Hoxa3P02831 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hoxa3P02831 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hoxa3P02831 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hoxa3P02831 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Hoxa3P02831 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC14.95□□□□□ -0.02
Hoxa3P02831 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Hoxa3P02831 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Hoxa3P02831 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Hoxa3P02831 Gm44832-201ENSMUST00000208849 2303 ntBASIC14.95□□□□□ -0.02
Hoxa3P02831 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Hoxa3P02831 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Hoxa3P02831 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Hoxa3P02831 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hoxa3P02831 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hoxa3P02831 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Hoxa3P02831 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Hoxa3P02831 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Hoxa3P02831 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Hoxa3P02831 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Hoxa3P02831 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Hoxa3P02831 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC14.94□□□□□ -0.02
Hoxa3P02831 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hoxa3P02831 Gm45606-201ENSMUST00000209836 2795 ntBASIC14.94□□□□□ -0.02
Hoxa3P02831 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC14.94□□□□□ -0.02
Hoxa3P02831 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hoxa3P02831 Zfp783-201ENSMUST00000095946 670 ntBASIC14.94□□□□□ -0.02
Hoxa3P02831 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Hoxa3P02831 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Hoxa3P02831 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hoxa3P02831 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.94□□□□□ -0.02
Hoxa3P02831 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hoxa3P02831 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC14.94□□□□□ -0.02
Hoxa3P02831 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hoxa3P02831 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Hoxa3P02831 Rncr4-201ENSMUST00000194541 2234 ntBASIC14.93□□□□□ -0.02
Hoxa3P02831 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hoxa3P02831 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC14.93□□□□□ -0.02
Hoxa3P02831 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Hoxa3P02831 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hoxa3P02831 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Hoxa3P02831 Gm15378-201ENSMUST00000121894 207 ntBASIC14.93□□□□□ -0.02
Hoxa3P02831 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hoxa3P02831 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
Hoxa3P02831 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Hoxa3P02831 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC14.93□□□□□ -0.02
Hoxa3P02831 AC154649.1-201ENSMUST00000227392 384 ntBASIC14.93□□□□□ -0.02
Hoxa3P02831 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC14.93□□□□□ -0.02
Hoxa3P02831 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms