Protein–RNA interactions for Protein: P01878

Ig alpha chain C region, mousemouse

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01878 Gm21362-201ENSMUST00000194272 928 ntBASIC18.48■□□□□ 0.55
P01878 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
P01878 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
P01878 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
P01878 Gm10819-201ENSMUST00000099988 561 ntBASIC18.48■□□□□ 0.55
P01878 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
P01878 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
P01878 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
P01878 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
P01878 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
P01878 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
P01878 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
P01878 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
P01878 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
P01878 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
P01878 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
P01878 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.47■□□□□ 0.55
P01878 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
P01878 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
P01878 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
P01878 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
P01878 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
P01878 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.47■□□□□ 0.55
P01878 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
P01878 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.47■□□□□ 0.55
P01878 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.47■□□□□ 0.55
P01878 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
P01878 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
P01878 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
P01878 Gm10459-201ENSMUST00000202708 1155 ntBASIC18.47■□□□□ 0.55
P01878 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.47■□□□□ 0.55
P01878 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
P01878 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
P01878 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
P01878 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
P01878 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
P01878 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.47■□□□□ 0.55
P01878 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
P01878 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
P01878 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
P01878 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
P01878 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
P01878 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
P01878 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
P01878 Gm10013-201ENSMUST00000106074 672 ntBASIC18.46■□□□□ 0.55
P01878 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
P01878 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
P01878 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.46■□□□□ 0.55
P01878 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
P01878 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
P01878 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
P01878 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
P01878 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
P01878 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
P01878 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.46■□□□□ 0.54
P01878 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
P01878 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
P01878 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
P01878 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
P01878 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
P01878 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
P01878 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
P01878 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
P01878 Gm10418-201ENSMUST00000100943 576 ntBASIC18.45■□□□□ 0.54
P01878 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
P01878 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
P01878 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
P01878 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
P01878 Gm7638-201ENSMUST00000121348 967 ntBASIC18.45■□□□□ 0.54
P01878 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
P01878 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.45■□□□□ 0.54
P01878 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.45■□□□□ 0.54
P01878 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.45■□□□□ 0.54
P01878 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
P01878 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
P01878 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
P01878 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
P01878 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
P01878 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
P01878 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
P01878 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
P01878 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.44■□□□□ 0.54
P01878 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
P01878 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
P01878 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
P01878 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
P01878 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
P01878 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
P01878 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.44■□□□□ 0.54
P01878 Gm6345-202ENSMUST00000180900 204 ntBASIC18.44■□□□□ 0.54
P01878 Gm29791-202ENSMUST00000207888 369 ntBASIC18.44■□□□□ 0.54
P01878 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.44■□□□□ 0.54
P01878 Gm7791-201ENSMUST00000219066 539 ntBASIC18.44■□□□□ 0.54
P01878 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
P01878 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
P01878 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
P01878 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
P01878 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
P01878 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
P01878 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms