Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Best1O88870 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.2■□□□□ 0.34
Best1O88870 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Best1O88870 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Best1O88870 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Best1O88870 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Best1O88870 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Best1O88870 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.19■□□□□ 0.34
Best1O88870 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Best1O88870 Gm13401-201ENSMUST00000117074 291 ntBASIC17.19■□□□□ 0.34
Best1O88870 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Best1O88870 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.19■□□□□ 0.34
Best1O88870 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.19■□□□□ 0.34
Best1O88870 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Best1O88870 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Best1O88870 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Best1O88870 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Best1O88870 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Best1O88870 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Best1O88870 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Best1O88870 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Best1O88870 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Best1O88870 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.19■□□□□ 0.34
Best1O88870 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.19■□□□□ 0.34
Best1O88870 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Best1O88870 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Best1O88870 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Best1O88870 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.18■□□□□ 0.34
Best1O88870 Gm15565-201ENSMUST00000118890 427 ntBASIC17.18■□□□□ 0.34
Best1O88870 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.18■□□□□ 0.34
Best1O88870 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.18■□□□□ 0.34
Best1O88870 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.18■□□□□ 0.34
Best1O88870 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Best1O88870 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.18■□□□□ 0.34
Best1O88870 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Best1O88870 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Best1O88870 Mir7071-201ENSMUST00000184847 69 ntBASIC17.18■□□□□ 0.34
Best1O88870 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.18■□□□□ 0.34
Best1O88870 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Best1O88870 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Best1O88870 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Best1O88870 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Best1O88870 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Best1O88870 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Best1O88870 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Best1O88870 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.18■□□□□ 0.34
Best1O88870 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Best1O88870 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Best1O88870 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Best1O88870 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Best1O88870 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Best1O88870 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Best1O88870 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.17■□□□□ 0.34
Best1O88870 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Best1O88870 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Best1O88870 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Best1O88870 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.17■□□□□ 0.34
Best1O88870 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.17■□□□□ 0.34
Best1O88870 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Best1O88870 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.17■□□□□ 0.34
Best1O88870 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.17■□□□□ 0.34
Best1O88870 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Best1O88870 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Best1O88870 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Best1O88870 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Best1O88870 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Best1O88870 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Best1O88870 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Best1O88870 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Best1O88870 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Best1O88870 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Best1O88870 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Best1O88870 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Best1O88870 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Best1O88870 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.16■□□□□ 0.34
Best1O88870 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.16■□□□□ 0.34
Best1O88870 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.16■□□□□ 0.34
Best1O88870 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Best1O88870 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Best1O88870 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Best1O88870 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.16■□□□□ 0.34
Best1O88870 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Best1O88870 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Best1O88870 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Best1O88870 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Best1O88870 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Best1O88870 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Best1O88870 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.16■□□□□ 0.34
Best1O88870 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Best1O88870 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
Best1O88870 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Best1O88870 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Best1O88870 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.15■□□□□ 0.34
Best1O88870 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Best1O88870 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.15■□□□□ 0.34
Best1O88870 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Best1O88870 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Best1O88870 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Best1O88870 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Best1O88870 Gm30025-201ENSMUST00000218555 728 ntBASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms