Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hcn3O88705 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hcn3O88705 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hcn3O88705 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hcn3O88705 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Hcn3O88705 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hcn3O88705 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hcn3O88705 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hcn3O88705 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hcn3O88705 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.12■□□□□ 0.33
Hcn3O88705 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hcn3O88705 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Hcn3O88705 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Hcn3O88705 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hcn3O88705 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hcn3O88705 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hcn3O88705 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hcn3O88705 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hcn3O88705 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hcn3O88705 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Hcn3O88705 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hcn3O88705 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hcn3O88705 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hcn3O88705 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Hcn3O88705 Gm27801-201ENSMUST00000184174 223 ntBASIC17.11■□□□□ 0.33
Hcn3O88705 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.11■□□□□ 0.33
Hcn3O88705 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hcn3O88705 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hcn3O88705 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hcn3O88705 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hcn3O88705 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hcn3O88705 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hcn3O88705 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hcn3O88705 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hcn3O88705 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Hcn3O88705 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hcn3O88705 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hcn3O88705 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.1■□□□□ 0.33
Hcn3O88705 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hcn3O88705 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hcn3O88705 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hcn3O88705 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hcn3O88705 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hcn3O88705 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hcn3O88705 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hcn3O88705 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.1■□□□□ 0.33
Hcn3O88705 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hcn3O88705 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.1■□□□□ 0.33
Hcn3O88705 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Hcn3O88705 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hcn3O88705 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hcn3O88705 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hcn3O88705 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hcn3O88705 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hcn3O88705 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hcn3O88705 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
Hcn3O88705 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hcn3O88705 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.1■□□□□ 0.33
Hcn3O88705 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Hcn3O88705 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hcn3O88705 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hcn3O88705 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hcn3O88705 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hcn3O88705 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hcn3O88705 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.09■□□□□ 0.33
Hcn3O88705 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hcn3O88705 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.09■□□□□ 0.33
Hcn3O88705 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.09■□□□□ 0.33
Hcn3O88705 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hcn3O88705 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hcn3O88705 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hcn3O88705 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hcn3O88705 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hcn3O88705 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hcn3O88705 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.08■□□□□ 0.33
Hcn3O88705 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Hcn3O88705 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
Hcn3O88705 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.08■□□□□ 0.32
Hcn3O88705 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.08■□□□□ 0.32
Hcn3O88705 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Hcn3O88705 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hcn3O88705 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Hcn3O88705 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hcn3O88705 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Hcn3O88705 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.08■□□□□ 0.32
Hcn3O88705 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hcn3O88705 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Hcn3O88705 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hcn3O88705 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Hcn3O88705 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hcn3O88705 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.07■□□□□ 0.32
Hcn3O88705 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
Hcn3O88705 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hcn3O88705 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Hcn3O88705 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hcn3O88705 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hcn3O88705 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hcn3O88705 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hcn3O88705 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hcn3O88705 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms