Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Slc6a20bO88575 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slc6a20bO88575 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slc6a20bO88575 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Slc6a20bO88575 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slc6a20bO88575 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.56■□□□□ 0.72
Slc6a20bO88575 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Slc6a20bO88575 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slc6a20bO88575 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC19.56■□□□□ 0.72
Slc6a20bO88575 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slc6a20bO88575 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
Slc6a20bO88575 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Slc6a20bO88575 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC19.56■□□□□ 0.72
Slc6a20bO88575 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Slc6a20bO88575 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slc6a20bO88575 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Slc6a20bO88575 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Slc6a20bO88575 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Slc6a20bO88575 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Slc6a20bO88575 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Slc6a20bO88575 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Slc6a20bO88575 Gm7638-201ENSMUST00000121348 967 ntBASIC19.55■□□□□ 0.72
Slc6a20bO88575 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Slc6a20bO88575 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Slc6a20bO88575 Gm17808-201ENSMUST00000200859 894 ntBASIC19.55■□□□□ 0.72
Slc6a20bO88575 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Slc6a20bO88575 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Slc6a20bO88575 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Slc6a20bO88575 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Slc6a20bO88575 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Slc6a20bO88575 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slc6a20bO88575 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC19.54■□□□□ 0.72
Slc6a20bO88575 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slc6a20bO88575 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slc6a20bO88575 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Slc6a20bO88575 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slc6a20bO88575 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Slc6a20bO88575 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Slc6a20bO88575 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Slc6a20bO88575 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slc6a20bO88575 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slc6a20bO88575 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.54■□□□□ 0.72
Slc6a20bO88575 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slc6a20bO88575 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Slc6a20bO88575 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Slc6a20bO88575 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.53■□□□□ 0.72
Slc6a20bO88575 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC19.53■□□□□ 0.72
Slc6a20bO88575 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC19.53■□□□□ 0.72
Slc6a20bO88575 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slc6a20bO88575 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slc6a20bO88575 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slc6a20bO88575 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Slc6a20bO88575 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Slc6a20bO88575 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Slc6a20bO88575 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Slc6a20bO88575 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Slc6a20bO88575 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Slc6a20bO88575 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Slc6a20bO88575 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC19.52■□□□□ 0.72
Slc6a20bO88575 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Slc6a20bO88575 Mir1668-201ENSMUST00000184114 107 ntBASIC19.52■□□□□ 0.72
Slc6a20bO88575 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Slc6a20bO88575 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Slc6a20bO88575 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.52■□□□□ 0.72
Slc6a20bO88575 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Slc6a20bO88575 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Slc6a20bO88575 Spsb2-203ENSMUST00000112473 1322 ntBASIC19.51■□□□□ 0.71
Slc6a20bO88575 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Slc6a20bO88575 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc6a20bO88575 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc6a20bO88575 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Slc6a20bO88575 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc6a20bO88575 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc6a20bO88575 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Slc6a20bO88575 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc6a20bO88575 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
Slc6a20bO88575 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC19.51■□□□□ 0.71
Slc6a20bO88575 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC19.51■□□□□ 0.71
Slc6a20bO88575 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc6a20bO88575 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc6a20bO88575 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc6a20bO88575 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc6a20bO88575 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Slc6a20bO88575 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Slc6a20bO88575 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc6a20bO88575 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc6a20bO88575 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Slc6a20bO88575 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Slc6a20bO88575 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Slc6a20bO88575 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Slc6a20bO88575 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.5■□□□□ 0.71
Slc6a20bO88575 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Slc6a20bO88575 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC19.5■□□□□ 0.71
Slc6a20bO88575 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Slc6a20bO88575 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Slc6a20bO88575 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Slc6a20bO88575 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Slc6a20bO88575 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Slc6a20bO88575 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Slc6a20bO88575 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms