Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17■□□□□ 0.31
Tgfbr3O88393 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tgfbr3O88393 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17■□□□□ 0.31
Tgfbr3O88393 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
Tgfbr3O88393 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Tgfbr3O88393 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tgfbr3O88393 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tgfbr3O88393 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.99■□□□□ 0.31
Tgfbr3O88393 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Tgfbr3O88393 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Tgfbr3O88393 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Tgfbr3O88393 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tgfbr3O88393 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tgfbr3O88393 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tgfbr3O88393 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Tgfbr3O88393 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tgfbr3O88393 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.99■□□□□ 0.31
Tgfbr3O88393 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tgfbr3O88393 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Tgfbr3O88393 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Tgfbr3O88393 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Tgfbr3O88393 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Tgfbr3O88393 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Tgfbr3O88393 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.98■□□□□ 0.31
Tgfbr3O88393 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Tgfbr3O88393 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Tgfbr3O88393 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Tgfbr3O88393 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Tgfbr3O88393 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Tgfbr3O88393 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Tgfbr3O88393 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Tgfbr3O88393 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.98■□□□□ 0.31
Tgfbr3O88393 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Tgfbr3O88393 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Tgfbr3O88393 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tgfbr3O88393 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.97■□□□□ 0.31
Tgfbr3O88393 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Tgfbr3O88393 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Tgfbr3O88393 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Tgfbr3O88393 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Tgfbr3O88393 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Tgfbr3O88393 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Tgfbr3O88393 Gm33142-201ENSMUST00000193913 867 ntBASIC16.97■□□□□ 0.31
Tgfbr3O88393 Gm4974-201ENSMUST00000209974 875 ntBASIC16.97■□□□□ 0.31
Tgfbr3O88393 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.97■□□□□ 0.31
Tgfbr3O88393 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tgfbr3O88393 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tgfbr3O88393 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tgfbr3O88393 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tgfbr3O88393 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Tgfbr3O88393 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tgfbr3O88393 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tgfbr3O88393 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tgfbr3O88393 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tgfbr3O88393 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tgfbr3O88393 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Tgfbr3O88393 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.96■□□□□ 0.31
Tgfbr3O88393 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Tgfbr3O88393 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tgfbr3O88393 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tgfbr3O88393 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tgfbr3O88393 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tgfbr3O88393 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Tgfbr3O88393 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Tgfbr3O88393 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Tgfbr3O88393 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.96■□□□□ 0.3
Tgfbr3O88393 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tgfbr3O88393 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Tgfbr3O88393 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Tgfbr3O88393 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tgfbr3O88393 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Tgfbr3O88393 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tgfbr3O88393 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Tgfbr3O88393 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Tgfbr3O88393 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Tgfbr3O88393 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
Tgfbr3O88393 Gm18101-201ENSMUST00000215769 548 ntBASIC16.95■□□□□ 0.3
Tgfbr3O88393 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.95■□□□□ 0.3
Tgfbr3O88393 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Tgfbr3O88393 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Tgfbr3O88393 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Tgfbr3O88393 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tgfbr3O88393 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tgfbr3O88393 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tgfbr3O88393 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.95■□□□□ 0.3
Tgfbr3O88393 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tgfbr3O88393 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Tgfbr3O88393 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tgfbr3O88393 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tgfbr3O88393 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tgfbr3O88393 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Tgfbr3O88393 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.95■□□□□ 0.3
Tgfbr3O88393 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tgfbr3O88393 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.94■□□□□ 0.3
Tgfbr3O88393 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Tgfbr3O88393 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tgfbr3O88393 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Tgfbr3O88393 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Tgfbr3O88393 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Tgfbr3O88393 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms