Protein–RNA interactions for Protein: O70491

Stra6, Receptor for retinol uptake STRA6, mousemouse

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stra6O70491 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Stra6O70491 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Stra6O70491 Tgds-204ENSMUST00000228543 1594 ntBASIC19.8■□□□□ 0.76
Stra6O70491 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC19.8■□□□□ 0.76
Stra6O70491 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.8■□□□□ 0.76
Stra6O70491 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Stra6O70491 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
Stra6O70491 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Stra6O70491 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Stra6O70491 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Stra6O70491 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
Stra6O70491 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Stra6O70491 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Stra6O70491 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Stra6O70491 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Stra6O70491 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Stra6O70491 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Stra6O70491 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Stra6O70491 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Stra6O70491 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC19.79■□□□□ 0.76
Stra6O70491 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Stra6O70491 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Stra6O70491 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Stra6O70491 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Stra6O70491 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Stra6O70491 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Stra6O70491 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Stra6O70491 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Stra6O70491 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Stra6O70491 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Stra6O70491 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Stra6O70491 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Stra6O70491 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Stra6O70491 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Stra6O70491 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Stra6O70491 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Stra6O70491 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Stra6O70491 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Stra6O70491 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Stra6O70491 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Stra6O70491 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
Stra6O70491 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
Stra6O70491 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Stra6O70491 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Stra6O70491 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Stra6O70491 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Stra6O70491 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Stra6O70491 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Stra6O70491 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Stra6O70491 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.77■□□□□ 0.76
Stra6O70491 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Stra6O70491 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Stra6O70491 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.76■□□□□ 0.75
Stra6O70491 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
Stra6O70491 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Stra6O70491 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Stra6O70491 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.76■□□□□ 0.75
Stra6O70491 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Stra6O70491 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Stra6O70491 Gm38027-201ENSMUST00000192315 235 ntBASIC19.76■□□□□ 0.75
Stra6O70491 Gm9694-201ENSMUST00000193347 1189 ntBASIC19.76■□□□□ 0.75
Stra6O70491 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Stra6O70491 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Stra6O70491 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Stra6O70491 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Stra6O70491 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Stra6O70491 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Stra6O70491 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Stra6O70491 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Stra6O70491 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Stra6O70491 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC19.75■□□□□ 0.75
Stra6O70491 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC19.75■□□□□ 0.75
Stra6O70491 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC19.75■□□□□ 0.75
Stra6O70491 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Stra6O70491 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Stra6O70491 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Stra6O70491 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Stra6O70491 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Stra6O70491 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Stra6O70491 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC19.74■□□□□ 0.75
Stra6O70491 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Stra6O70491 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Stra6O70491 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Stra6O70491 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Stra6O70491 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC19.74■□□□□ 0.75
Stra6O70491 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Stra6O70491 Gm43353-201ENSMUST00000199224 1295 ntBASIC19.74■□□□□ 0.75
Stra6O70491 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC19.74■□□□□ 0.75
Stra6O70491 AC159205.6-201ENSMUST00000224935 887 ntBASIC19.74■□□□□ 0.75
Stra6O70491 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.74■□□□□ 0.75
Stra6O70491 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Stra6O70491 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Stra6O70491 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Stra6O70491 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Stra6O70491 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Stra6O70491 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Stra6O70491 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Stra6O70491 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Stra6O70491 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Stra6O70491 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms