Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Ubr1O70481 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC23.37■■□□□ 1.33
Ubr1O70481 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC23.37■■□□□ 1.33
Ubr1O70481 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Ubr1O70481 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Ubr1O70481 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
Ubr1O70481 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Ubr1O70481 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC23.36■■□□□ 1.33
Ubr1O70481 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
Ubr1O70481 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Ubr1O70481 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Ubr1O70481 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC23.36■■□□□ 1.33
Ubr1O70481 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
Ubr1O70481 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Ubr1O70481 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Ubr1O70481 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Ubr1O70481 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Ubr1O70481 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ubr1O70481 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ubr1O70481 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ubr1O70481 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ubr1O70481 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Ubr1O70481 Gm37374-201ENSMUST00000194954 1829 ntBASIC23.35■■□□□ 1.33
Ubr1O70481 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ubr1O70481 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
Ubr1O70481 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ubr1O70481 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC23.34■■□□□ 1.33
Ubr1O70481 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ubr1O70481 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ubr1O70481 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ubr1O70481 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
Ubr1O70481 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ubr1O70481 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ubr1O70481 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Ubr1O70481 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Ubr1O70481 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Ubr1O70481 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC23.33■■□□□ 1.33
Ubr1O70481 Mir1668-201ENSMUST00000184114 107 ntBASIC23.33■■□□□ 1.33
Ubr1O70481 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Ubr1O70481 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
Ubr1O70481 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Ubr1O70481 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC23.33■■□□□ 1.33
Ubr1O70481 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.32
Ubr1O70481 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.32
Ubr1O70481 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC23.33■■□□□ 1.32
Ubr1O70481 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.32
Ubr1O70481 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
Ubr1O70481 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
Ubr1O70481 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
Ubr1O70481 Gm22697-201ENSMUST00000175194 63 ntBASIC23.32■■□□□ 1.32
Ubr1O70481 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ubr1O70481 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ubr1O70481 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ubr1O70481 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ubr1O70481 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ubr1O70481 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ubr1O70481 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ubr1O70481 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC23.32■■□□□ 1.32
Ubr1O70481 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ubr1O70481 Il3ra-202ENSMUST00000223589 738 ntBASIC23.32■■□□□ 1.32
Ubr1O70481 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ubr1O70481 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ubr1O70481 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ubr1O70481 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Ubr1O70481 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ubr1O70481 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ubr1O70481 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC23.31■■□□□ 1.32
Ubr1O70481 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Ubr1O70481 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ubr1O70481 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ubr1O70481 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ubr1O70481 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ubr1O70481 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ubr1O70481 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC23.3■■□□□ 1.32
Ubr1O70481 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
Ubr1O70481 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC23.3■■□□□ 1.32
Ubr1O70481 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC23.3■■□□□ 1.32
Ubr1O70481 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Ubr1O70481 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ubr1O70481 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC23.3■■□□□ 1.32
Ubr1O70481 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ubr1O70481 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
Ubr1O70481 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ubr1O70481 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ubr1O70481 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
Ubr1O70481 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ubr1O70481 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC23.29■■□□□ 1.32
Ubr1O70481 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC23.29■■□□□ 1.32
Ubr1O70481 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
Ubr1O70481 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ubr1O70481 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
Ubr1O70481 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ubr1O70481 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ubr1O70481 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
Ubr1O70481 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ubr1O70481 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ubr1O70481 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Ubr1O70481 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
Ubr1O70481 Ank2-226ENSMUST00000189368 339 ntBASIC23.28■■□□□ 1.32
Ubr1O70481 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC23.28■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms