Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rpl35aO55142 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rpl35aO55142 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Rpl35aO55142 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpl35aO55142 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpl35aO55142 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rpl35aO55142 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpl35aO55142 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpl35aO55142 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpl35aO55142 Gm22325-201ENSMUST00000158904 308 ntBASIC13.33□□□□□ -0.28
Rpl35aO55142 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rpl35aO55142 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpl35aO55142 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpl35aO55142 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpl35aO55142 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rpl35aO55142 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Rpl35aO55142 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Rpl35aO55142 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Rpl35aO55142 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rpl35aO55142 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpl35aO55142 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Rpl35aO55142 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpl35aO55142 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpl35aO55142 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpl35aO55142 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rpl35aO55142 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Rpl35aO55142 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpl35aO55142 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpl35aO55142 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpl35aO55142 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpl35aO55142 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpl35aO55142 Gm13168-201ENSMUST00000121771 632 ntBASIC13.32□□□□□ -0.28
Rpl35aO55142 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rpl35aO55142 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rpl35aO55142 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rpl35aO55142 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC13.32□□□□□ -0.28
Rpl35aO55142 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Rpl35aO55142 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rpl35aO55142 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rpl35aO55142 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC13.32□□□□□ -0.28
Rpl35aO55142 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rpl35aO55142 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpl35aO55142 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpl35aO55142 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpl35aO55142 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC13.31□□□□□ -0.28
Rpl35aO55142 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rpl35aO55142 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC13.31□□□□□ -0.28
Rpl35aO55142 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC13.31□□□□□ -0.28
Rpl35aO55142 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpl35aO55142 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpl35aO55142 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpl35aO55142 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Rpl35aO55142 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpl35aO55142 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpl35aO55142 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC13.31□□□□□ -0.28
Rpl35aO55142 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rpl35aO55142 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpl35aO55142 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpl35aO55142 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC13.3□□□□□ -0.28
Rpl35aO55142 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Rpl35aO55142 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpl35aO55142 Flg-201ENSMUST00000050758 1488 ntBASIC13.3□□□□□ -0.28
Rpl35aO55142 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpl35aO55142 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpl35aO55142 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpl35aO55142 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13.3□□□□□ -0.28
Rpl35aO55142 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC13.3□□□□□ -0.28
Rpl35aO55142 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC13.3□□□□□ -0.28
Rpl35aO55142 Gm8520-201ENSMUST00000186517 868 ntBASIC13.3□□□□□ -0.28
Rpl35aO55142 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rpl35aO55142 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpl35aO55142 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Rpl35aO55142 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Rpl35aO55142 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rpl35aO55142 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpl35aO55142 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rpl35aO55142 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpl35aO55142 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpl35aO55142 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpl35aO55142 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Rpl35aO55142 Gm42922-201ENSMUST00000195887 2078 ntBASIC13.3□□□□□ -0.28
Rpl35aO55142 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rpl35aO55142 Dio3-201ENSMUST00000097228 1449 ntBASIC13.3□□□□□ -0.28
Rpl35aO55142 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpl35aO55142 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpl35aO55142 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpl35aO55142 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Rpl35aO55142 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpl35aO55142 Gm43231-201ENSMUST00000202960 2258 ntBASIC13.29□□□□□ -0.28
Rpl35aO55142 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpl35aO55142 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpl35aO55142 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpl35aO55142 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpl35aO55142 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC13.29□□□□□ -0.28
Rpl35aO55142 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpl35aO55142 Gm22240-201ENSMUST00000175225 82 ntBASIC13.29□□□□□ -0.28
Rpl35aO55142 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpl35aO55142 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpl35aO55142 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpl35aO55142 Gm21596-201ENSMUST00000178049 1316 ntBASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms