Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Npc1O35604 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Npc1O35604 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.44■□□□□ 0.38
Npc1O35604 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Npc1O35604 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Npc1O35604 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Npc1O35604 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Npc1O35604 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Npc1O35604 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Npc1O35604 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Npc1O35604 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Npc1O35604 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Npc1O35604 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Npc1O35604 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Npc1O35604 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Npc1O35604 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Npc1O35604 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.43■□□□□ 0.38
Npc1O35604 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
Npc1O35604 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Npc1O35604 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Npc1O35604 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Npc1O35604 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Npc1O35604 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Npc1O35604 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.43■□□□□ 0.38
Npc1O35604 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.43■□□□□ 0.38
Npc1O35604 Gm38285-201ENSMUST00000192928 922 ntBASIC17.43■□□□□ 0.38
Npc1O35604 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Npc1O35604 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.43■□□□□ 0.38
Npc1O35604 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Npc1O35604 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Npc1O35604 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Npc1O35604 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Npc1O35604 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Npc1O35604 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Npc1O35604 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Npc1O35604 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Npc1O35604 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.42■□□□□ 0.38
Npc1O35604 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
Npc1O35604 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.42■□□□□ 0.38
Npc1O35604 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
Npc1O35604 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.42■□□□□ 0.38
Npc1O35604 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Npc1O35604 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Npc1O35604 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Npc1O35604 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Npc1O35604 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Npc1O35604 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Npc1O35604 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Npc1O35604 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
Npc1O35604 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Npc1O35604 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.41■□□□□ 0.38
Npc1O35604 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Npc1O35604 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.41■□□□□ 0.38
Npc1O35604 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Npc1O35604 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Npc1O35604 Gm15378-201ENSMUST00000121894 207 ntBASIC17.41■□□□□ 0.38
Npc1O35604 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.41■□□□□ 0.38
Npc1O35604 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Npc1O35604 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Npc1O35604 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Npc1O35604 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Npc1O35604 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Npc1O35604 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Npc1O35604 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Npc1O35604 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Npc1O35604 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Npc1O35604 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Npc1O35604 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Npc1O35604 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.4■□□□□ 0.38
Npc1O35604 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Npc1O35604 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Npc1O35604 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.4■□□□□ 0.38
Npc1O35604 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.4■□□□□ 0.38
Npc1O35604 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Npc1O35604 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Npc1O35604 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.4■□□□□ 0.38
Npc1O35604 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Npc1O35604 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Npc1O35604 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Npc1O35604 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
Npc1O35604 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Npc1O35604 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Npc1O35604 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Npc1O35604 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Npc1O35604 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Npc1O35604 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Npc1O35604 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Npc1O35604 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Npc1O35604 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Npc1O35604 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Npc1O35604 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Npc1O35604 Gm10138-203ENSMUST00000206952 366 ntBASIC17.39■□□□□ 0.37
Npc1O35604 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Npc1O35604 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Npc1O35604 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Npc1O35604 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Npc1O35604 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Npc1O35604 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.39■□□□□ 0.37
Npc1O35604 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Npc1O35604 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms