Protein–RNA interactions for Protein: O35595

Ptch2, Protein patched homolog 2, mousemouse

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch2O35595 Mir6349-201ENSMUST00000184059 97 ntBASIC18.32■□□□□ 0.52
Ptch2O35595 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ptch2O35595 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC18.32■□□□□ 0.52
Ptch2O35595 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ptch2O35595 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ptch2O35595 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ptch2O35595 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ptch2O35595 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ptch2O35595 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
Ptch2O35595 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ptch2O35595 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ptch2O35595 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Ptch2O35595 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.31■□□□□ 0.52
Ptch2O35595 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.31■□□□□ 0.52
Ptch2O35595 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Ptch2O35595 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ptch2O35595 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ptch2O35595 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ptch2O35595 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ptch2O35595 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Ptch2O35595 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ptch2O35595 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ptch2O35595 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Ptch2O35595 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.3■□□□□ 0.52
Ptch2O35595 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ptch2O35595 Mir2861-201ENSMUST00000175539 82 ntBASIC18.3■□□□□ 0.52
Ptch2O35595 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ptch2O35595 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ptch2O35595 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ptch2O35595 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ptch2O35595 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ptch2O35595 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ptch2O35595 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ptch2O35595 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
Ptch2O35595 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ptch2O35595 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.3■□□□□ 0.52
Ptch2O35595 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ptch2O35595 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.3■□□□□ 0.52
Ptch2O35595 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ptch2O35595 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ptch2O35595 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.29■□□□□ 0.52
Ptch2O35595 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ptch2O35595 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ptch2O35595 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Ptch2O35595 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ptch2O35595 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ptch2O35595 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ptch2O35595 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ptch2O35595 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ptch2O35595 BC021767-201ENSMUST00000126387 1716 ntBASIC18.29■□□□□ 0.52
Ptch2O35595 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ptch2O35595 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ptch2O35595 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ptch2O35595 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ptch2O35595 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ptch2O35595 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ptch2O35595 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ptch2O35595 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ptch2O35595 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Ptch2O35595 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ptch2O35595 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ptch2O35595 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ptch2O35595 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ptch2O35595 Timm23-208ENSMUST00000226683 750 ntBASIC18.28■□□□□ 0.52
Ptch2O35595 Odf3b-204ENSMUST00000227834 930 ntBASIC18.28■□□□□ 0.52
Ptch2O35595 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Ptch2O35595 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.28■□□□□ 0.52
Ptch2O35595 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ptch2O35595 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Ptch2O35595 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Ptch2O35595 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ptch2O35595 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ptch2O35595 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ptch2O35595 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ptch2O35595 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ptch2O35595 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ptch2O35595 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.27■□□□□ 0.52
Ptch2O35595 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ptch2O35595 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ptch2O35595 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ptch2O35595 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ptch2O35595 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ptch2O35595 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ptch2O35595 Gm7889-201ENSMUST00000185591 958 ntBASIC18.27■□□□□ 0.52
Ptch2O35595 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ptch2O35595 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ptch2O35595 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.27■□□□□ 0.52
Ptch2O35595 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ptch2O35595 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Ptch2O35595 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ptch2O35595 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ptch2O35595 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Ptch2O35595 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ptch2O35595 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ptch2O35595 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ptch2O35595 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
Ptch2O35595 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ptch2O35595 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ptch2O35595 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ptch2O35595 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms