Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
Col15a1O35206 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Col15a1O35206 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC23.03■■□□□ 1.28
Col15a1O35206 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC23.03■■□□□ 1.28
Col15a1O35206 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Col15a1O35206 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Col15a1O35206 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Col15a1O35206 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Col15a1O35206 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Col15a1O35206 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
Col15a1O35206 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Col15a1O35206 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Col15a1O35206 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Col15a1O35206 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
Col15a1O35206 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
Col15a1O35206 Gm7284-201ENSMUST00000131667 944 ntBASIC23.02■■□□□ 1.28
Col15a1O35206 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC23.02■■□□□ 1.28
Col15a1O35206 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC23.02■■□□□ 1.28
Col15a1O35206 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Col15a1O35206 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Col15a1O35206 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Col15a1O35206 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Col15a1O35206 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Col15a1O35206 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
Col15a1O35206 Gm25016-201ENSMUST00000158399 131 ntBASIC23.01■■□□□ 1.27
Col15a1O35206 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Col15a1O35206 Gm21559-201ENSMUST00000220638 855 ntBASIC23.01■■□□□ 1.27
Col15a1O35206 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Col15a1O35206 Gm8587-201ENSMUST00000076538 843 ntBASIC23.01■■□□□ 1.27
Col15a1O35206 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Col15a1O35206 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
Col15a1O35206 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Col15a1O35206 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Col15a1O35206 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Col15a1O35206 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC23.01■■□□□ 1.27
Col15a1O35206 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Col15a1O35206 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
Col15a1O35206 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Col15a1O35206 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Col15a1O35206 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Col15a1O35206 Gm14859-201ENSMUST00000117752 357 ntBASIC23.01■■□□□ 1.27
Col15a1O35206 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Col15a1O35206 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Col15a1O35206 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Col15a1O35206 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Col15a1O35206 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Col15a1O35206 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Col15a1O35206 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC23■■□□□ 1.27
Col15a1O35206 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC23■■□□□ 1.27
Col15a1O35206 Gm5784-201ENSMUST00000179344 2478 ntBASIC23■■□□□ 1.27
Col15a1O35206 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Col15a1O35206 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
Col15a1O35206 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
Col15a1O35206 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC22.99■■□□□ 1.27
Col15a1O35206 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Col15a1O35206 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Col15a1O35206 Gm13474-201ENSMUST00000122466 815 ntBASIC22.99■■□□□ 1.27
Col15a1O35206 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC22.99■■□□□ 1.27
Col15a1O35206 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Col15a1O35206 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Col15a1O35206 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC22.98■■□□□ 1.27
Col15a1O35206 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Col15a1O35206 Gm10418-201ENSMUST00000100943 576 ntBASIC22.98■■□□□ 1.27
Col15a1O35206 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC22.98■■□□□ 1.27
Col15a1O35206 Gm14464-201ENSMUST00000119658 1254 ntBASIC22.98■■□□□ 1.27
Col15a1O35206 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Col15a1O35206 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Col15a1O35206 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Col15a1O35206 Mir1668-201ENSMUST00000184114 107 ntBASIC22.97■■□□□ 1.27
Col15a1O35206 Gm5587-201ENSMUST00000206270 674 ntBASIC22.97■■□□□ 1.27
Col15a1O35206 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Col15a1O35206 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Col15a1O35206 Spsb2-203ENSMUST00000112473 1322 ntBASIC22.97■■□□□ 1.27
Col15a1O35206 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Col15a1O35206 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Col15a1O35206 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Col15a1O35206 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
Col15a1O35206 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Col15a1O35206 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Col15a1O35206 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Col15a1O35206 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Col15a1O35206 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC22.96■■□□□ 1.27
Col15a1O35206 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC22.96■■□□□ 1.27
Col15a1O35206 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Col15a1O35206 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Col15a1O35206 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Col15a1O35206 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Col15a1O35206 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Col15a1O35206 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.27
Col15a1O35206 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC22.95■■□□□ 1.26
Col15a1O35206 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Col15a1O35206 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Col15a1O35206 Gm29791-202ENSMUST00000207888 369 ntBASIC22.95■■□□□ 1.26
Col15a1O35206 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Col15a1O35206 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
Col15a1O35206 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Col15a1O35206 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Col15a1O35206 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Col15a1O35206 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Col15a1O35206 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms