Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.17■□□□□ 0.5
Tnfrsf11bO08712 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.17■□□□□ 0.5
Tnfrsf11bO08712 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnfrsf11bO08712 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfrsf11bO08712 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfrsf11bO08712 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfrsf11bO08712 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Tnfrsf11bO08712 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.16■□□□□ 0.5
Tnfrsf11bO08712 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfrsf11bO08712 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfrsf11bO08712 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Tnfrsf11bO08712 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Tnfrsf11bO08712 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Tnfrsf11bO08712 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.16■□□□□ 0.5
Tnfrsf11bO08712 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.16■□□□□ 0.5
Tnfrsf11bO08712 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfrsf11bO08712 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Tnfrsf11bO08712 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.16■□□□□ 0.5
Tnfrsf11bO08712 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfrsf11bO08712 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.16■□□□□ 0.5
Tnfrsf11bO08712 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfrsf11bO08712 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfrsf11bO08712 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfrsf11bO08712 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfrsf11bO08712 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfrsf11bO08712 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tnfrsf11bO08712 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tnfrsf11bO08712 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.15■□□□□ 0.5
Tnfrsf11bO08712 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.15■□□□□ 0.5
Tnfrsf11bO08712 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tnfrsf11bO08712 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Tnfrsf11bO08712 Gm7290-201ENSMUST00000104990 617 ntBASIC18.15■□□□□ 0.5
Tnfrsf11bO08712 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.15■□□□□ 0.5
Tnfrsf11bO08712 Gm12918-201ENSMUST00000120234 636 ntBASIC18.15■□□□□ 0.5
Tnfrsf11bO08712 Gm15710-201ENSMUST00000121821 636 ntBASIC18.15■□□□□ 0.5
Tnfrsf11bO08712 Gm5075-201ENSMUST00000196916 622 ntBASIC18.15■□□□□ 0.5
Tnfrsf11bO08712 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tnfrsf11bO08712 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tnfrsf11bO08712 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tnfrsf11bO08712 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.15■□□□□ 0.5
Tnfrsf11bO08712 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.15■□□□□ 0.5
Tnfrsf11bO08712 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Tnfrsf11bO08712 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tnfrsf11bO08712 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Tnfrsf11bO08712 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tnfrsf11bO08712 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tnfrsf11bO08712 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Tnfrsf11bO08712 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
Tnfrsf11bO08712 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.14■□□□□ 0.5
Tnfrsf11bO08712 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Tnfrsf11bO08712 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Tnfrsf11bO08712 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tnfrsf11bO08712 Idnk-204ENSMUST00000226010 1898 ntBASIC18.14■□□□□ 0.49
Tnfrsf11bO08712 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tnfrsf11bO08712 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tnfrsf11bO08712 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tnfrsf11bO08712 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tnfrsf11bO08712 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.14■□□□□ 0.49
Tnfrsf11bO08712 Gm6211-202ENSMUST00000167849 925 ntBASIC18.14■□□□□ 0.49
Tnfrsf11bO08712 Gm42569-201ENSMUST00000200539 472 ntBASIC18.14■□□□□ 0.49
Tnfrsf11bO08712 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.14■□□□□ 0.49
Tnfrsf11bO08712 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tnfrsf11bO08712 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
Tnfrsf11bO08712 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
Tnfrsf11bO08712 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Tnfrsf11bO08712 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tnfrsf11bO08712 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Tnfrsf11bO08712 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tnfrsf11bO08712 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tnfrsf11bO08712 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tnfrsf11bO08712 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tnfrsf11bO08712 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tnfrsf11bO08712 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tnfrsf11bO08712 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tnfrsf11bO08712 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Tnfrsf11bO08712 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tnfrsf11bO08712 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Tnfrsf11bO08712 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tnfrsf11bO08712 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tnfrsf11bO08712 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tnfrsf11bO08712 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Tnfrsf11bO08712 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tnfrsf11bO08712 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tnfrsf11bO08712 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tnfrsf11bO08712 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tnfrsf11bO08712 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tnfrsf11bO08712 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tnfrsf11bO08712 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tnfrsf11bO08712 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tnfrsf11bO08712 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tnfrsf11bO08712 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tnfrsf11bO08712 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Tnfrsf11bO08712 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Tnfrsf11bO08712 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.12■□□□□ 0.49
Tnfrsf11bO08712 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tnfrsf11bO08712 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.12■□□□□ 0.49
Tnfrsf11bO08712 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
Tnfrsf11bO08712 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Tnfrsf11bO08712 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Tnfrsf11bO08712 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms