Protein–RNA interactions for Protein: J3QNH3

Gm21788, Predicted gene, 21788, mousemouse

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm21788J3QNH3 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm21788J3QNH3 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC15.12■□□□□ 0.01
Gm21788J3QNH3 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Gm21788J3QNH3 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Gm21788J3QNH3 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Gm21788J3QNH3 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm21788J3QNH3 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Gm21788J3QNH3 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm21788J3QNH3 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC15.12■□□□□ 0.01
Gm21788J3QNH3 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC15.12■□□□□ 0.01
Gm21788J3QNH3 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC15.12■□□□□ 0.01
Gm21788J3QNH3 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC15.12■□□□□ 0.01
Gm21788J3QNH3 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm21788J3QNH3 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Gm21788J3QNH3 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Gm21788J3QNH3 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Gm21788J3QNH3 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm21788J3QNH3 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm21788J3QNH3 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm21788J3QNH3 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm21788J3QNH3 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Gm21788J3QNH3 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Gm21788J3QNH3 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm21788J3QNH3 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Gm21788J3QNH3 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
Gm21788J3QNH3 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm21788J3QNH3 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm21788J3QNH3 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm21788J3QNH3 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Gm21788J3QNH3 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Gm21788J3QNH3 Gm13509-201ENSMUST00000119733 1308 ntBASIC15.11■□□□□ 0.01
Gm21788J3QNH3 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm21788J3QNH3 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm21788J3QNH3 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Gm21788J3QNH3 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm21788J3QNH3 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Gm21788J3QNH3 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm21788J3QNH3 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm21788J3QNH3 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Gm21788J3QNH3 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm21788J3QNH3 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm21788J3QNH3 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Gm21788J3QNH3 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm21788J3QNH3 Gm42900-201ENSMUST00000197184 2167 ntBASIC15.09■□□□□ 0.01
Gm21788J3QNH3 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm21788J3QNH3 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm21788J3QNH3 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm21788J3QNH3 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm21788J3QNH3 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm21788J3QNH3 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm21788J3QNH3 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm21788J3QNH3 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC15.09■□□□□ 0.01
Gm21788J3QNH3 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Gm21788J3QNH3 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC15.09■□□□□ 0.01
Gm21788J3QNH3 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC15.09■□□□□ 0.01
Gm21788J3QNH3 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Gm21788J3QNH3 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm21788J3QNH3 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm21788J3QNH3 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Gm21788J3QNH3 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Gm21788J3QNH3 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm21788J3QNH3 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Gm21788J3QNH3 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm21788J3QNH3 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm21788J3QNH3 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm21788J3QNH3 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC15.08■□□□□ 0.01
Gm21788J3QNH3 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Gm21788J3QNH3 Gm7290-201ENSMUST00000104990 617 ntBASIC15.08■□□□□ 0
Gm21788J3QNH3 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC15.08■□□□□ 0
Gm21788J3QNH3 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC15.08■□□□□ 0
Gm21788J3QNH3 Gm12918-201ENSMUST00000120234 636 ntBASIC15.08■□□□□ 0
Gm21788J3QNH3 Gm15710-201ENSMUST00000121821 636 ntBASIC15.08■□□□□ 0
Gm21788J3QNH3 Gm18284-201ENSMUST00000172604 624 ntBASIC15.08■□□□□ 0
Gm21788J3QNH3 Gm5075-201ENSMUST00000196916 622 ntBASIC15.08■□□□□ 0
Gm21788J3QNH3 Gm6365-201ENSMUST00000054711 744 ntBASIC15.08■□□□□ 0
Gm21788J3QNH3 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC15.08■□□□□ 0
Gm21788J3QNH3 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC15.08■□□□□ 0
Gm21788J3QNH3 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Gm21788J3QNH3 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Gm21788J3QNH3 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Gm21788J3QNH3 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Gm21788J3QNH3 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Gm21788J3QNH3 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Gm21788J3QNH3 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Gm21788J3QNH3 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Gm21788J3QNH3 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm21788J3QNH3 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.07■□□□□ 0
Gm21788J3QNH3 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Gm21788J3QNH3 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm21788J3QNH3 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm21788J3QNH3 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Gm21788J3QNH3 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Gm21788J3QNH3 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC15.07■□□□□ 0
Gm21788J3QNH3 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Gm21788J3QNH3 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Gm21788J3QNH3 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm21788J3QNH3 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC15.07■□□□□ 0
Gm21788J3QNH3 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC15.07■□□□□ 0
Gm21788J3QNH3 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm21788J3QNH3 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms