Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav13d-3J3QMG8 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav13d-3J3QMG8 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav13d-3J3QMG8 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC15.73■□□□□ 0.11
Trav13d-3J3QMG8 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav13d-3J3QMG8 Gm11927-201ENSMUST00000118472 759 ntBASIC15.73■□□□□ 0.11
Trav13d-3J3QMG8 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC15.73■□□□□ 0.11
Trav13d-3J3QMG8 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC15.73■□□□□ 0.11
Trav13d-3J3QMG8 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC15.73■□□□□ 0.11
Trav13d-3J3QMG8 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav13d-3J3QMG8 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Trav13d-3J3QMG8 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav13d-3J3QMG8 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav13d-3J3QMG8 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav13d-3J3QMG8 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav13d-3J3QMG8 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav13d-3J3QMG8 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav13d-3J3QMG8 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav13d-3J3QMG8 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav13d-3J3QMG8 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Trav13d-3J3QMG8 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Trav13d-3J3QMG8 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav13d-3J3QMG8 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Trav13d-3J3QMG8 Gm2559-201ENSMUST00000201323 363 ntBASIC15.72■□□□□ 0.11
Trav13d-3J3QMG8 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav13d-3J3QMG8 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav13d-3J3QMG8 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav13d-3J3QMG8 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav13d-3J3QMG8 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav13d-3J3QMG8 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav13d-3J3QMG8 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav13d-3J3QMG8 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav13d-3J3QMG8 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav13d-3J3QMG8 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav13d-3J3QMG8 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Trav13d-3J3QMG8 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Trav13d-3J3QMG8 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Trav13d-3J3QMG8 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Trav13d-3J3QMG8 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav13d-3J3QMG8 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav13d-3J3QMG8 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Trav13d-3J3QMG8 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC15.71■□□□□ 0.11
Trav13d-3J3QMG8 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav13d-3J3QMG8 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav13d-3J3QMG8 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav13d-3J3QMG8 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Trav13d-3J3QMG8 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav13d-3J3QMG8 Gm44832-201ENSMUST00000208849 2303 ntBASIC15.71■□□□□ 0.1
Trav13d-3J3QMG8 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav13d-3J3QMG8 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav13d-3J3QMG8 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav13d-3J3QMG8 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav13d-3J3QMG8 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Trav13d-3J3QMG8 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC15.7■□□□□ 0.1
Trav13d-3J3QMG8 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC15.7■□□□□ 0.1
Trav13d-3J3QMG8 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC15.7■□□□□ 0.1
Trav13d-3J3QMG8 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav13d-3J3QMG8 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav13d-3J3QMG8 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC15.7■□□□□ 0.1
Trav13d-3J3QMG8 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC15.7■□□□□ 0.1
Trav13d-3J3QMG8 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav13d-3J3QMG8 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav13d-3J3QMG8 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav13d-3J3QMG8 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav13d-3J3QMG8 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav13d-3J3QMG8 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav13d-3J3QMG8 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav13d-3J3QMG8 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav13d-3J3QMG8 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav13d-3J3QMG8 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Trav13d-3J3QMG8 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav13d-3J3QMG8 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav13d-3J3QMG8 Dio3-201ENSMUST00000097228 1449 ntBASIC15.69■□□□□ 0.1
Trav13d-3J3QMG8 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav13d-3J3QMG8 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav13d-3J3QMG8 Gm12896-201ENSMUST00000118430 226 ntBASIC15.69■□□□□ 0.1
Trav13d-3J3QMG8 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
Trav13d-3J3QMG8 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav13d-3J3QMG8 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav13d-3J3QMG8 Mtag2-201ENSMUST00000058665 714 ntBASIC15.69■□□□□ 0.1
Trav13d-3J3QMG8 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav13d-3J3QMG8 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav13d-3J3QMG8 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav13d-3J3QMG8 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav13d-3J3QMG8 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC15.68■□□□□ 0.1
Trav13d-3J3QMG8 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC15.68■□□□□ 0.1
Trav13d-3J3QMG8 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav13d-3J3QMG8 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav13d-3J3QMG8 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav13d-3J3QMG8 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav13d-3J3QMG8 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav13d-3J3QMG8 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav13d-3J3QMG8 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav13d-3J3QMG8 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav13d-3J3QMG8 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav13d-3J3QMG8 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav13d-3J3QMG8 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC15.68■□□□□ 0.1
Trav13d-3J3QMG8 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav13d-3J3QMG8 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav13d-3J3QMG8 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms