Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Nkx1-1G3UXB3 Olfr129-201ENSMUST00000122318 993 ntBASIC20.33■□□□□ 0.85
Nkx1-1G3UXB3 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
Nkx1-1G3UXB3 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC20.33■□□□□ 0.85
Nkx1-1G3UXB3 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nkx1-1G3UXB3 Gm2756-201ENSMUST00000195851 400 ntBASIC20.33■□□□□ 0.85
Nkx1-1G3UXB3 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Nkx1-1G3UXB3 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC20.33■□□□□ 0.85
Nkx1-1G3UXB3 Crisp4-201ENSMUST00000026876 1252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nkx1-1G3UXB3 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nkx1-1G3UXB3 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nkx1-1G3UXB3 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.33■□□□□ 0.84
Nkx1-1G3UXB3 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nkx1-1G3UXB3 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nkx1-1G3UXB3 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Nkx1-1G3UXB3 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nkx1-1G3UXB3 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nkx1-1G3UXB3 Gm10654-201ENSMUST00000098653 1633 ntBASIC20.32■□□□□ 0.84
Nkx1-1G3UXB3 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nkx1-1G3UXB3 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nkx1-1G3UXB3 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Nkx1-1G3UXB3 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC20.32■□□□□ 0.84
Nkx1-1G3UXB3 Gm8097-201ENSMUST00000117903 829 ntBASIC20.32■□□□□ 0.84
Nkx1-1G3UXB3 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nkx1-1G3UXB3 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC20.32■□□□□ 0.84
Nkx1-1G3UXB3 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC20.32■□□□□ 0.84
Nkx1-1G3UXB3 AC159301.1-201ENSMUST00000225130 1182 ntBASIC20.32■□□□□ 0.84
Nkx1-1G3UXB3 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.32■□□□□ 0.84
Nkx1-1G3UXB3 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Nkx1-1G3UXB3 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Nkx1-1G3UXB3 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nkx1-1G3UXB3 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nkx1-1G3UXB3 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nkx1-1G3UXB3 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nkx1-1G3UXB3 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nkx1-1G3UXB3 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Nkx1-1G3UXB3 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC20.31■□□□□ 0.84
Nkx1-1G3UXB3 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC20.31■□□□□ 0.84
Nkx1-1G3UXB3 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Nkx1-1G3UXB3 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Nkx1-1G3UXB3 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nkx1-1G3UXB3 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC20.31■□□□□ 0.84
Nkx1-1G3UXB3 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Nkx1-1G3UXB3 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.31■□□□□ 0.84
Nkx1-1G3UXB3 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nkx1-1G3UXB3 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nkx1-1G3UXB3 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Nkx1-1G3UXB3 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nkx1-1G3UXB3 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC20.3■□□□□ 0.84
Nkx1-1G3UXB3 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC20.3■□□□□ 0.84
Nkx1-1G3UXB3 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC20.3■□□□□ 0.84
Nkx1-1G3UXB3 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC20.3■□□□□ 0.84
Nkx1-1G3UXB3 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Nkx1-1G3UXB3 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nkx1-1G3UXB3 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nkx1-1G3UXB3 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nkx1-1G3UXB3 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nkx1-1G3UXB3 Gm42535-201ENSMUST00000197312 1399 ntBASIC20.3■□□□□ 0.84
Nkx1-1G3UXB3 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nkx1-1G3UXB3 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nkx1-1G3UXB3 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
Nkx1-1G3UXB3 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nkx1-1G3UXB3 AC154849.3-201ENSMUST00000223733 1660 ntBASIC20.29■□□□□ 0.84
Nkx1-1G3UXB3 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nkx1-1G3UXB3 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.29■□□□□ 0.84
Nkx1-1G3UXB3 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nkx1-1G3UXB3 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nkx1-1G3UXB3 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC20.29■□□□□ 0.84
Nkx1-1G3UXB3 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC20.29■□□□□ 0.84
Nkx1-1G3UXB3 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Nkx1-1G3UXB3 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Nkx1-1G3UXB3 CT943659.1-201ENSMUST00000215459 326 ntBASIC20.29■□□□□ 0.84
Nkx1-1G3UXB3 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nkx1-1G3UXB3 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Nkx1-1G3UXB3 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nkx1-1G3UXB3 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Nkx1-1G3UXB3 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC20.29■□□□□ 0.84
Nkx1-1G3UXB3 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nkx1-1G3UXB3 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Nkx1-1G3UXB3 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nkx1-1G3UXB3 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nkx1-1G3UXB3 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nkx1-1G3UXB3 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nkx1-1G3UXB3 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Nkx1-1G3UXB3 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nkx1-1G3UXB3 Gm23935-201ENSMUST00000102303 57 ntBASIC20.28■□□□□ 0.84
Nkx1-1G3UXB3 Gm24270-201ENSMUST00000102326 57 ntBASIC20.28■□□□□ 0.84
Nkx1-1G3UXB3 Gm12895-201ENSMUST00000122214 226 ntBASIC20.28■□□□□ 0.84
Nkx1-1G3UXB3 Gm24245-201ENSMUST00000157318 57 ntBASIC20.28■□□□□ 0.84
Nkx1-1G3UXB3 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nkx1-1G3UXB3 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC20.28■□□□□ 0.84
Nkx1-1G3UXB3 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nkx1-1G3UXB3 AC114573.1-201ENSMUST00000224120 1210 ntBASIC20.28■□□□□ 0.84
Nkx1-1G3UXB3 Rnf212-201ENSMUST00000068946 288 ntTSL 5 BASIC20.28■□□□□ 0.84
Nkx1-1G3UXB3 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nkx1-1G3UXB3 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Nkx1-1G3UXB3 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC20.28■□□□□ 0.84
Nkx1-1G3UXB3 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nkx1-1G3UXB3 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nkx1-1G3UXB3 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms