Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Ccdc188F6WEU2 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.15■□□□□ 0.5
Ccdc188F6WEU2 Gm23935-201ENSMUST00000102303 57 ntBASIC18.15■□□□□ 0.5
Ccdc188F6WEU2 Gm24270-201ENSMUST00000102326 57 ntBASIC18.15■□□□□ 0.5
Ccdc188F6WEU2 Gm24245-201ENSMUST00000157318 57 ntBASIC18.15■□□□□ 0.5
Ccdc188F6WEU2 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc188F6WEU2 Gm6736-201ENSMUST00000166583 948 ntBASIC18.15■□□□□ 0.5
Ccdc188F6WEU2 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC18.15■□□□□ 0.5
Ccdc188F6WEU2 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC18.15■□□□□ 0.5
Ccdc188F6WEU2 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc188F6WEU2 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc188F6WEU2 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC18.15■□□□□ 0.5
Ccdc188F6WEU2 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc188F6WEU2 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc188F6WEU2 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc188F6WEU2 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc188F6WEU2 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc188F6WEU2 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ccdc188F6WEU2 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Ccdc188F6WEU2 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc188F6WEU2 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
Ccdc188F6WEU2 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.14■□□□□ 0.49
Ccdc188F6WEU2 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc188F6WEU2 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC18.14■□□□□ 0.49
Ccdc188F6WEU2 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC18.14■□□□□ 0.49
Ccdc188F6WEU2 Gm24841-201ENSMUST00000158676 357 ntBASIC18.14■□□□□ 0.49
Ccdc188F6WEU2 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc188F6WEU2 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Ccdc188F6WEU2 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc188F6WEU2 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ccdc188F6WEU2 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ccdc188F6WEU2 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ccdc188F6WEU2 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Ccdc188F6WEU2 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC18.13■□□□□ 0.49
Ccdc188F6WEU2 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC18.13■□□□□ 0.49
Ccdc188F6WEU2 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ccdc188F6WEU2 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC18.13■□□□□ 0.49
Ccdc188F6WEU2 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.13■□□□□ 0.49
Ccdc188F6WEU2 Gm5264-201ENSMUST00000190584 848 ntBASIC18.13■□□□□ 0.49
Ccdc188F6WEU2 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ccdc188F6WEU2 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC18.13■□□□□ 0.49
Ccdc188F6WEU2 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
Ccdc188F6WEU2 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ccdc188F6WEU2 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ccdc188F6WEU2 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ccdc188F6WEU2 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ccdc188F6WEU2 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
Ccdc188F6WEU2 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ccdc188F6WEU2 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Ccdc188F6WEU2 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC18.12■□□□□ 0.49
Ccdc188F6WEU2 Mir5131-201ENSMUST00000175426 93 ntBASIC18.12■□□□□ 0.49
Ccdc188F6WEU2 Ighv6-1-201ENSMUST00000193612 343 ntBASIC18.12■□□□□ 0.49
Ccdc188F6WEU2 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Ccdc188F6WEU2 Gm5364-201ENSMUST00000216789 889 ntBASIC18.12■□□□□ 0.49
Ccdc188F6WEU2 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ccdc188F6WEU2 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.12■□□□□ 0.49
Ccdc188F6WEU2 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc188F6WEU2 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc188F6WEU2 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC18.11■□□□□ 0.49
Ccdc188F6WEU2 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc188F6WEU2 Gm11779-201ENSMUST00000118541 368 ntBASIC18.11■□□□□ 0.49
Ccdc188F6WEU2 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC18.11■□□□□ 0.49
Ccdc188F6WEU2 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc188F6WEU2 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Ccdc188F6WEU2 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc188F6WEU2 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc188F6WEU2 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc188F6WEU2 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc188F6WEU2 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc188F6WEU2 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc188F6WEU2 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Ccdc188F6WEU2 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ccdc188F6WEU2 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ccdc188F6WEU2 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Ccdc188F6WEU2 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
Ccdc188F6WEU2 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ccdc188F6WEU2 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Ccdc188F6WEU2 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ccdc188F6WEU2 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ccdc188F6WEU2 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC18.1■□□□□ 0.49
Ccdc188F6WEU2 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ccdc188F6WEU2 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Ccdc188F6WEU2 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Ccdc188F6WEU2 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ccdc188F6WEU2 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ccdc188F6WEU2 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc188F6WEU2 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC18.09■□□□□ 0.49
Ccdc188F6WEU2 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc188F6WEU2 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Ccdc188F6WEU2 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc188F6WEU2 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc188F6WEU2 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.09■□□□□ 0.49
Ccdc188F6WEU2 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Ccdc188F6WEU2 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC18.09■□□□□ 0.49
Ccdc188F6WEU2 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC18.09■□□□□ 0.49
Ccdc188F6WEU2 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Ccdc188F6WEU2 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc188F6WEU2 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc188F6WEU2 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc188F6WEU2 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms