Protein–RNA interactions for Protein: E9Q0B4

Cdr1, Cerebellar degeneration-related antigen 1, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdr1E9Q0B4 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdr1E9Q0B4 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.67■□□□□ 0.42
Cdr1E9Q0B4 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.67■□□□□ 0.42
Cdr1E9Q0B4 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cdr1E9Q0B4 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdr1E9Q0B4 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.67■□□□□ 0.42
Cdr1E9Q0B4 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdr1E9Q0B4 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.67■□□□□ 0.42
Cdr1E9Q0B4 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdr1E9Q0B4 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cdr1E9Q0B4 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cdr1E9Q0B4 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdr1E9Q0B4 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cdr1E9Q0B4 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdr1E9Q0B4 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cdr1E9Q0B4 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cdr1E9Q0B4 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cdr1E9Q0B4 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdr1E9Q0B4 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
Cdr1E9Q0B4 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cdr1E9Q0B4 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.66■□□□□ 0.42
Cdr1E9Q0B4 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cdr1E9Q0B4 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.66■□□□□ 0.42
Cdr1E9Q0B4 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdr1E9Q0B4 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cdr1E9Q0B4 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdr1E9Q0B4 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cdr1E9Q0B4 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdr1E9Q0B4 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdr1E9Q0B4 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdr1E9Q0B4 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Cdr1E9Q0B4 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdr1E9Q0B4 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdr1E9Q0B4 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdr1E9Q0B4 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdr1E9Q0B4 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Cdr1E9Q0B4 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdr1E9Q0B4 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdr1E9Q0B4 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Cdr1E9Q0B4 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdr1E9Q0B4 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdr1E9Q0B4 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdr1E9Q0B4 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Cdr1E9Q0B4 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cdr1E9Q0B4 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdr1E9Q0B4 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdr1E9Q0B4 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdr1E9Q0B4 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Cdr1E9Q0B4 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Cdr1E9Q0B4 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdr1E9Q0B4 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cdr1E9Q0B4 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Cdr1E9Q0B4 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdr1E9Q0B4 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdr1E9Q0B4 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdr1E9Q0B4 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdr1E9Q0B4 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdr1E9Q0B4 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdr1E9Q0B4 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cdr1E9Q0B4 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdr1E9Q0B4 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Cdr1E9Q0B4 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdr1E9Q0B4 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdr1E9Q0B4 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.63■□□□□ 0.41
Cdr1E9Q0B4 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.63■□□□□ 0.41
Cdr1E9Q0B4 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdr1E9Q0B4 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.63■□□□□ 0.41
Cdr1E9Q0B4 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.63■□□□□ 0.41
Cdr1E9Q0B4 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cdr1E9Q0B4 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdr1E9Q0B4 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdr1E9Q0B4 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdr1E9Q0B4 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdr1E9Q0B4 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cdr1E9Q0B4 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
Cdr1E9Q0B4 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdr1E9Q0B4 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdr1E9Q0B4 Tgds-204ENSMUST00000228543 1594 ntBASIC17.62■□□□□ 0.41
Cdr1E9Q0B4 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdr1E9Q0B4 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC17.62■□□□□ 0.41
Cdr1E9Q0B4 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cdr1E9Q0B4 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Cdr1E9Q0B4 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdr1E9Q0B4 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdr1E9Q0B4 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.62■□□□□ 0.41
Cdr1E9Q0B4 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdr1E9Q0B4 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Cdr1E9Q0B4 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdr1E9Q0B4 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Cdr1E9Q0B4 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdr1E9Q0B4 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Cdr1E9Q0B4 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.62■□□□□ 0.41
Cdr1E9Q0B4 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdr1E9Q0B4 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
Cdr1E9Q0B4 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdr1E9Q0B4 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cdr1E9Q0B4 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Cdr1E9Q0B4 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cdr1E9Q0B4 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.61■□□□□ 0.41
Cdr1E9Q0B4 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms