Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Pcdh17E9PXF0 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh17E9PXF0 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.61■□□□□ 0.25
Pcdh17E9PXF0 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh17E9PXF0 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh17E9PXF0 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh17E9PXF0 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Pcdh17E9PXF0 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh17E9PXF0 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.6■□□□□ 0.25
Pcdh17E9PXF0 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.6■□□□□ 0.25
Pcdh17E9PXF0 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh17E9PXF0 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.6■□□□□ 0.25
Pcdh17E9PXF0 Gm7977-201ENSMUST00000193787 748 ntBASIC16.6■□□□□ 0.25
Pcdh17E9PXF0 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh17E9PXF0 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.6■□□□□ 0.25
Pcdh17E9PXF0 Gm18025-201ENSMUST00000221733 862 ntBASIC16.6■□□□□ 0.25
Pcdh17E9PXF0 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh17E9PXF0 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh17E9PXF0 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh17E9PXF0 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh17E9PXF0 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh17E9PXF0 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh17E9PXF0 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh17E9PXF0 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh17E9PXF0 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh17E9PXF0 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh17E9PXF0 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh17E9PXF0 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh17E9PXF0 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh17E9PXF0 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh17E9PXF0 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.59■□□□□ 0.25
Pcdh17E9PXF0 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh17E9PXF0 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.59■□□□□ 0.25
Pcdh17E9PXF0 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Pcdh17E9PXF0 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.59■□□□□ 0.25
Pcdh17E9PXF0 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh17E9PXF0 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh17E9PXF0 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
Pcdh17E9PXF0 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Pcdh17E9PXF0 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh17E9PXF0 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh17E9PXF0 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh17E9PXF0 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
Pcdh17E9PXF0 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh17E9PXF0 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.59■□□□□ 0.25
Pcdh17E9PXF0 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Pcdh17E9PXF0 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Pcdh17E9PXF0 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.59■□□□□ 0.25
Pcdh17E9PXF0 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh17E9PXF0 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh17E9PXF0 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Pcdh17E9PXF0 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.59■□□□□ 0.25
Pcdh17E9PXF0 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdh17E9PXF0 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.58■□□□□ 0.25
Pcdh17E9PXF0 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdh17E9PXF0 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdh17E9PXF0 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdh17E9PXF0 Grk6-206ENSMUST00000224995 2971 ntBASIC16.58■□□□□ 0.24
Pcdh17E9PXF0 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.58■□□□□ 0.24
Pcdh17E9PXF0 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh17E9PXF0 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh17E9PXF0 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh17E9PXF0 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.58■□□□□ 0.24
Pcdh17E9PXF0 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh17E9PXF0 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.58■□□□□ 0.24
Pcdh17E9PXF0 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Pcdh17E9PXF0 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh17E9PXF0 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh17E9PXF0 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh17E9PXF0 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh17E9PXF0 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh17E9PXF0 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.57■□□□□ 0.24
Pcdh17E9PXF0 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh17E9PXF0 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh17E9PXF0 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh17E9PXF0 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.57■□□□□ 0.24
Pcdh17E9PXF0 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh17E9PXF0 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Pcdh17E9PXF0 Gm42545-201ENSMUST00000202755 922 ntBASIC16.57■□□□□ 0.24
Pcdh17E9PXF0 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh17E9PXF0 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Pcdh17E9PXF0 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh17E9PXF0 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh17E9PXF0 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Pcdh17E9PXF0 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh17E9PXF0 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh17E9PXF0 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Pcdh17E9PXF0 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh17E9PXF0 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.56■□□□□ 0.24
Pcdh17E9PXF0 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.56■□□□□ 0.24
Pcdh17E9PXF0 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh17E9PXF0 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh17E9PXF0 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh17E9PXF0 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh17E9PXF0 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh17E9PXF0 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.56■□□□□ 0.24
Pcdh17E9PXF0 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.56■□□□□ 0.24
Pcdh17E9PXF0 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Pcdh17E9PXF0 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.56■□□□□ 0.24
Pcdh17E9PXF0 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms