Protein–RNA interactions for Protein: B9EKX1

Ptchd4, Patched domain-containing protein 4, mousemouse

Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd4B9EKX1 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ptchd4B9EKX1 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.24■□□□□ 0.67
Ptchd4B9EKX1 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Ptchd4B9EKX1 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ptchd4B9EKX1 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ptchd4B9EKX1 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ptchd4B9EKX1 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ptchd4B9EKX1 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ptchd4B9EKX1 Gm9694-201ENSMUST00000193347 1189 ntBASIC19.23■□□□□ 0.67
Ptchd4B9EKX1 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC19.23■□□□□ 0.67
Ptchd4B9EKX1 AC159205.6-201ENSMUST00000224935 887 ntBASIC19.23■□□□□ 0.67
Ptchd4B9EKX1 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Ptchd4B9EKX1 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ptchd4B9EKX1 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ptchd4B9EKX1 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ptchd4B9EKX1 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ptchd4B9EKX1 Gm37820-201ENSMUST00000194021 2147 ntBASIC19.22■□□□□ 0.67
Ptchd4B9EKX1 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ptchd4B9EKX1 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ptchd4B9EKX1 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC19.22■□□□□ 0.67
Ptchd4B9EKX1 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ptchd4B9EKX1 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC19.22■□□□□ 0.67
Ptchd4B9EKX1 Gm27463-201ENSMUST00000183569 57 ntBASIC19.22■□□□□ 0.67
Ptchd4B9EKX1 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Ptchd4B9EKX1 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC19.22■□□□□ 0.67
Ptchd4B9EKX1 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC19.22■□□□□ 0.67
Ptchd4B9EKX1 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ptchd4B9EKX1 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ptchd4B9EKX1 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ptchd4B9EKX1 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ptchd4B9EKX1 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ptchd4B9EKX1 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ptchd4B9EKX1 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ptchd4B9EKX1 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.21■□□□□ 0.67
Ptchd4B9EKX1 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ptchd4B9EKX1 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ptchd4B9EKX1 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.21■□□□□ 0.67
Ptchd4B9EKX1 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Ptchd4B9EKX1 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Ptchd4B9EKX1 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ptchd4B9EKX1 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC19.21■□□□□ 0.67
Ptchd4B9EKX1 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ptchd4B9EKX1 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC19.21■□□□□ 0.67
Ptchd4B9EKX1 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC19.21■□□□□ 0.67
Ptchd4B9EKX1 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC19.21■□□□□ 0.67
Ptchd4B9EKX1 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ptchd4B9EKX1 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ptchd4B9EKX1 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.21■□□□□ 0.67
Ptchd4B9EKX1 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ptchd4B9EKX1 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ptchd4B9EKX1 Gm10418-201ENSMUST00000100943 576 ntBASIC19.2■□□□□ 0.66
Ptchd4B9EKX1 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ptchd4B9EKX1 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ptchd4B9EKX1 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ptchd4B9EKX1 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ptchd4B9EKX1 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.2■□□□□ 0.66
Ptchd4B9EKX1 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ptchd4B9EKX1 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ptchd4B9EKX1 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Ptchd4B9EKX1 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
Ptchd4B9EKX1 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ptchd4B9EKX1 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ptchd4B9EKX1 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Ptchd4B9EKX1 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ptchd4B9EKX1 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ptchd4B9EKX1 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ptchd4B9EKX1 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ptchd4B9EKX1 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ptchd4B9EKX1 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC19.19■□□□□ 0.66
Ptchd4B9EKX1 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ptchd4B9EKX1 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ptchd4B9EKX1 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC19.19■□□□□ 0.66
Ptchd4B9EKX1 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC19.19■□□□□ 0.66
Ptchd4B9EKX1 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ptchd4B9EKX1 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.19■□□□□ 0.66
Ptchd4B9EKX1 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ptchd4B9EKX1 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ptchd4B9EKX1 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ptchd4B9EKX1 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ptchd4B9EKX1 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ptchd4B9EKX1 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Ptchd4B9EKX1 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Ptchd4B9EKX1 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ptchd4B9EKX1 Gm13401-201ENSMUST00000117074 291 ntBASIC19.18■□□□□ 0.66
Ptchd4B9EKX1 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC19.18■□□□□ 0.66
Ptchd4B9EKX1 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC19.18■□□□□ 0.66
Ptchd4B9EKX1 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Ptchd4B9EKX1 Gm43353-201ENSMUST00000199224 1295 ntBASIC19.18■□□□□ 0.66
Ptchd4B9EKX1 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ptchd4B9EKX1 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Ptchd4B9EKX1 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ptchd4B9EKX1 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ptchd4B9EKX1 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ptchd4B9EKX1 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ptchd4B9EKX1 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ptchd4B9EKX1 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ptchd4B9EKX1 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ptchd4B9EKX1 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Ptchd4B9EKX1 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ptchd4B9EKX1 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms