Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC14.5□□□□□ -0.09
Gm12887B1AVM1 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Gm12887B1AVM1 Gm37374-201ENSMUST00000194954 1829 ntBASIC14.5□□□□□ -0.09
Gm12887B1AVM1 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.5□□□□□ -0.09
Gm12887B1AVM1 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Gm12887B1AVM1 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Gm12887B1AVM1 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Gm12887B1AVM1 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Gm12887B1AVM1 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC14.49□□□□□ -0.09
Gm12887B1AVM1 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Gm12887B1AVM1 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Gm12887B1AVM1 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Gm12887B1AVM1 Gm11421-201ENSMUST00000122124 294 ntBASIC14.49□□□□□ -0.09
Gm12887B1AVM1 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Gm12887B1AVM1 Gm27801-201ENSMUST00000184174 223 ntBASIC14.49□□□□□ -0.09
Gm12887B1AVM1 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC14.49□□□□□ -0.09
Gm12887B1AVM1 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Gm12887B1AVM1 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Gm12887B1AVM1 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC14.49□□□□□ -0.09
Gm12887B1AVM1 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Gm12887B1AVM1 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Gm12887B1AVM1 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC14.49□□□□□ -0.09
Gm12887B1AVM1 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Gm12887B1AVM1 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Gm12887B1AVM1 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Gm12887B1AVM1 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.48□□□□□ -0.09
Gm12887B1AVM1 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Gm12887B1AVM1 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Gm12887B1AVM1 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Gm12887B1AVM1 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Gm12887B1AVM1 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Gm12887B1AVM1 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Gm12887B1AVM1 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Gm12887B1AVM1 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Gm12887B1AVM1 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Gm12887B1AVM1 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Gm12887B1AVM1 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Gm12887B1AVM1 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
Gm12887B1AVM1 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Gm12887B1AVM1 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Gm12887B1AVM1 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Gm12887B1AVM1 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Gm12887B1AVM1 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gm12887B1AVM1 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gm12887B1AVM1 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gm12887B1AVM1 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gm12887B1AVM1 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gm12887B1AVM1 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gm12887B1AVM1 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gm12887B1AVM1 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gm12887B1AVM1 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gm12887B1AVM1 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gm12887B1AVM1 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gm12887B1AVM1 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gm12887B1AVM1 Gm12251-201ENSMUST00000117893 792 ntBASIC14.47□□□□□ -0.09
Gm12887B1AVM1 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gm12887B1AVM1 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gm12887B1AVM1 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gm12887B1AVM1 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gm12887B1AVM1 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gm12887B1AVM1 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gm12887B1AVM1 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gm12887B1AVM1 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Gm12887B1AVM1 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Gm12887B1AVM1 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Gm12887B1AVM1 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gm12887B1AVM1 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gm12887B1AVM1 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gm12887B1AVM1 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gm12887B1AVM1 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gm12887B1AVM1 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Gm12887B1AVM1 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gm12887B1AVM1 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Gm12887B1AVM1 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC14.46□□□□□ -0.09
Gm12887B1AVM1 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Gm12887B1AVM1 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gm12887B1AVM1 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Gm12887B1AVM1 Gm37519-201ENSMUST00000191687 2210 ntBASIC14.46□□□□□ -0.1
Gm12887B1AVM1 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Gm12887B1AVM1 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Gm12887B1AVM1 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Gm12887B1AVM1 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Gm12887B1AVM1 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Gm12887B1AVM1 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Gm12887B1AVM1 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Gm12887B1AVM1 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Gm12887B1AVM1 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Gm12887B1AVM1 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Gm12887B1AVM1 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Gm12887B1AVM1 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Gm12887B1AVM1 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm12887B1AVM1 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm12887B1AVM1 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm12887B1AVM1 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC14.45□□□□□ -0.1
Gm12887B1AVM1 Gm45412-201ENSMUST00000210217 2275 ntBASIC14.45□□□□□ -0.1
Gm12887B1AVM1 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm12887B1AVM1 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm12887B1AVM1 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm12887B1AVM1 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm12887B1AVM1 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms