Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Sh2d4bA6X942 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.12■□□□□ 0.65
Sh2d4bA6X942 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sh2d4bA6X942 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sh2d4bA6X942 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Sh2d4bA6X942 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC19.12■□□□□ 0.65
Sh2d4bA6X942 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sh2d4bA6X942 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sh2d4bA6X942 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Sh2d4bA6X942 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sh2d4bA6X942 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Sh2d4bA6X942 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sh2d4bA6X942 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.11■□□□□ 0.65
Sh2d4bA6X942 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sh2d4bA6X942 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sh2d4bA6X942 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC19.11■□□□□ 0.65
Sh2d4bA6X942 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC19.11■□□□□ 0.65
Sh2d4bA6X942 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.11■□□□□ 0.65
Sh2d4bA6X942 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sh2d4bA6X942 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sh2d4bA6X942 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sh2d4bA6X942 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sh2d4bA6X942 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sh2d4bA6X942 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Sh2d4bA6X942 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Sh2d4bA6X942 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sh2d4bA6X942 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC19.1■□□□□ 0.65
Sh2d4bA6X942 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Sh2d4bA6X942 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC19.1■□□□□ 0.65
Sh2d4bA6X942 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.1■□□□□ 0.65
Sh2d4bA6X942 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sh2d4bA6X942 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Sh2d4bA6X942 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.1■□□□□ 0.65
Sh2d4bA6X942 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sh2d4bA6X942 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.1■□□□□ 0.65
Sh2d4bA6X942 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sh2d4bA6X942 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Sh2d4bA6X942 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sh2d4bA6X942 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
Sh2d4bA6X942 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Sh2d4bA6X942 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sh2d4bA6X942 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sh2d4bA6X942 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sh2d4bA6X942 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sh2d4bA6X942 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sh2d4bA6X942 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.09■□□□□ 0.65
Sh2d4bA6X942 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sh2d4bA6X942 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sh2d4bA6X942 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sh2d4bA6X942 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sh2d4bA6X942 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Sh2d4bA6X942 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.09■□□□□ 0.65
Sh2d4bA6X942 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC19.09■□□□□ 0.65
Sh2d4bA6X942 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sh2d4bA6X942 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sh2d4bA6X942 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sh2d4bA6X942 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sh2d4bA6X942 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sh2d4bA6X942 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Sh2d4bA6X942 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sh2d4bA6X942 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sh2d4bA6X942 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sh2d4bA6X942 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sh2d4bA6X942 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sh2d4bA6X942 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
Sh2d4bA6X942 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sh2d4bA6X942 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Sh2d4bA6X942 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Sh2d4bA6X942 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
Sh2d4bA6X942 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Sh2d4bA6X942 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Sh2d4bA6X942 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Sh2d4bA6X942 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Sh2d4bA6X942 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Sh2d4bA6X942 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Sh2d4bA6X942 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Sh2d4bA6X942 Gm10819-201ENSMUST00000099988 561 ntBASIC19.08■□□□□ 0.64
Sh2d4bA6X942 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Sh2d4bA6X942 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Sh2d4bA6X942 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Sh2d4bA6X942 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Sh2d4bA6X942 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Sh2d4bA6X942 Gm8668-201ENSMUST00000120559 1447 ntBASIC19.08■□□□□ 0.64
Sh2d4bA6X942 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Sh2d4bA6X942 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sh2d4bA6X942 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sh2d4bA6X942 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sh2d4bA6X942 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sh2d4bA6X942 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sh2d4bA6X942 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Sh2d4bA6X942 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Sh2d4bA6X942 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sh2d4bA6X942 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.07■□□□□ 0.64
Sh2d4bA6X942 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.07■□□□□ 0.64
Sh2d4bA6X942 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sh2d4bA6X942 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sh2d4bA6X942 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sh2d4bA6X942 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sh2d4bA6X942 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sh2d4bA6X942 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms