Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Col6a5A6H584 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col6a5A6H584 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Col6a5A6H584 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col6a5A6H584 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Col6a5A6H584 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Col6a5A6H584 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Col6a5A6H584 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Col6a5A6H584 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col6a5A6H584 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC13.54□□□□□ -0.24
Col6a5A6H584 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col6a5A6H584 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col6a5A6H584 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col6a5A6H584 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col6a5A6H584 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col6a5A6H584 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col6a5A6H584 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col6a5A6H584 Gm8097-201ENSMUST00000117903 829 ntBASIC13.54□□□□□ -0.24
Col6a5A6H584 Gm14057-201ENSMUST00000120631 482 ntBASIC13.54□□□□□ -0.24
Col6a5A6H584 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC13.54□□□□□ -0.24
Col6a5A6H584 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Col6a5A6H584 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Col6a5A6H584 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC13.53□□□□□ -0.24
Col6a5A6H584 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a5A6H584 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Col6a5A6H584 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Col6a5A6H584 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a5A6H584 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a5A6H584 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a5A6H584 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a5A6H584 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Col6a5A6H584 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a5A6H584 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a5A6H584 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a5A6H584 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC13.53□□□□□ -0.24
Col6a5A6H584 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Col6a5A6H584 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC13.53□□□□□ -0.24
Col6a5A6H584 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Col6a5A6H584 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC13.52□□□□□ -0.24
Col6a5A6H584 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col6a5A6H584 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC13.52□□□□□ -0.24
Col6a5A6H584 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col6a5A6H584 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Col6a5A6H584 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Col6a5A6H584 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Col6a5A6H584 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC13.52□□□□□ -0.24
Col6a5A6H584 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col6a5A6H584 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col6a5A6H584 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Col6a5A6H584 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col6a5A6H584 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Col6a5A6H584 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col6a5A6H584 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col6a5A6H584 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col6a5A6H584 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col6a5A6H584 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC13.52□□□□□ -0.25
Col6a5A6H584 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC13.52□□□□□ -0.25
Col6a5A6H584 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Col6a5A6H584 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col6a5A6H584 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col6a5A6H584 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col6a5A6H584 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Col6a5A6H584 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col6a5A6H584 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col6a5A6H584 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col6a5A6H584 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col6a5A6H584 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a5A6H584 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a5A6H584 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a5A6H584 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a5A6H584 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Col6a5A6H584 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a5A6H584 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a5A6H584 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a5A6H584 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a5A6H584 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a5A6H584 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a5A6H584 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a5A6H584 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a5A6H584 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a5A6H584 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC13.51□□□□□ -0.25
Col6a5A6H584 Gm9694-201ENSMUST00000193347 1189 ntBASIC13.51□□□□□ -0.25
Col6a5A6H584 Gm2213-201ENSMUST00000197485 688 ntBASIC13.51□□□□□ -0.25
Col6a5A6H584 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a5A6H584 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a5A6H584 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a5A6H584 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a5A6H584 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.51□□□□□ -0.25
Col6a5A6H584 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a5A6H584 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a5A6H584 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC13.5□□□□□ -0.25
Col6a5A6H584 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.5□□□□□ -0.25
Col6a5A6H584 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC13.5□□□□□ -0.25
Col6a5A6H584 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a5A6H584 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.5□□□□□ -0.25
Col6a5A6H584 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a5A6H584 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a5A6H584 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a5A6H584 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a5A6H584 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms