Protein–RNA interactions for Protein: A3KG49

Gm5640, Predicted gene 5640, mousemouse

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5640A3KG49 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm5640A3KG49 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm5640A3KG49 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Gm5640A3KG49 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm5640A3KG49 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm5640A3KG49 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm5640A3KG49 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm5640A3KG49 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Gm5640A3KG49 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm5640A3KG49 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Gm5640A3KG49 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Gm5640A3KG49 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.15■□□□□ 0.5
Gm5640A3KG49 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Gm5640A3KG49 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm5640A3KG49 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm5640A3KG49 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm5640A3KG49 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.15■□□□□ 0.5
Gm5640A3KG49 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.15■□□□□ 0.5
Gm5640A3KG49 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm5640A3KG49 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm5640A3KG49 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Gm5640A3KG49 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm5640A3KG49 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm5640A3KG49 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm5640A3KG49 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.14■□□□□ 0.5
Gm5640A3KG49 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Gm5640A3KG49 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.14■□□□□ 0.49
Gm5640A3KG49 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Gm5640A3KG49 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Gm5640A3KG49 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm5640A3KG49 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Gm5640A3KG49 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.14■□□□□ 0.49
Gm5640A3KG49 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Gm5640A3KG49 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.14■□□□□ 0.49
Gm5640A3KG49 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.14■□□□□ 0.49
Gm5640A3KG49 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm5640A3KG49 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm5640A3KG49 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm5640A3KG49 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm5640A3KG49 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm5640A3KG49 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.14■□□□□ 0.49
Gm5640A3KG49 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm5640A3KG49 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm5640A3KG49 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm5640A3KG49 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm5640A3KG49 Gm11421-201ENSMUST00000122124 294 ntBASIC18.13■□□□□ 0.49
Gm5640A3KG49 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm5640A3KG49 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm5640A3KG49 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
Gm5640A3KG49 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm5640A3KG49 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm5640A3KG49 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm5640A3KG49 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm5640A3KG49 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Gm5640A3KG49 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm5640A3KG49 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm5640A3KG49 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.12■□□□□ 0.49
Gm5640A3KG49 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm5640A3KG49 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm5640A3KG49 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.12■□□□□ 0.49
Gm5640A3KG49 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.12■□□□□ 0.49
Gm5640A3KG49 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm5640A3KG49 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Gm5640A3KG49 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Gm5640A3KG49 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
Gm5640A3KG49 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Gm5640A3KG49 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm5640A3KG49 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm5640A3KG49 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm5640A3KG49 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Gm5640A3KG49 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm5640A3KG49 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm5640A3KG49 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Gm5640A3KG49 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm5640A3KG49 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm5640A3KG49 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
Gm5640A3KG49 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm5640A3KG49 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.11■□□□□ 0.49
Gm5640A3KG49 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.11■□□□□ 0.49
Gm5640A3KG49 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm5640A3KG49 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm5640A3KG49 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm5640A3KG49 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm5640A3KG49 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm5640A3KG49 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm5640A3KG49 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Gm5640A3KG49 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm5640A3KG49 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm5640A3KG49 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Gm5640A3KG49 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm5640A3KG49 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm5640A3KG49 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.1■□□□□ 0.49
Gm5640A3KG49 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm5640A3KG49 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Gm5640A3KG49 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Gm5640A3KG49 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Gm5640A3KG49 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm5640A3KG49 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Gm5640A3KG49 Gm12922-201ENSMUST00000120626 809 ntBASIC18.1■□□□□ 0.49
Gm5640A3KG49 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms