Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Ubr4A2AN08 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC9.5□□□□□ -0.89
Ubr4A2AN08 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Ubr4A2AN08 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Ubr4A2AN08 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Ubr4A2AN08 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Ubr4A2AN08 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Ubr4A2AN08 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Ubr4A2AN08 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC9.5□□□□□ -0.89
Ubr4A2AN08 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC9.5□□□□□ -0.89
Ubr4A2AN08 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Ubr4A2AN08 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Ubr4A2AN08 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Ubr4A2AN08 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Ubr4A2AN08 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Ubr4A2AN08 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC9.49□□□□□ -0.89
Ubr4A2AN08 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Ubr4A2AN08 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Ubr4A2AN08 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Ubr4A2AN08 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Ubr4A2AN08 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC9.49□□□□□ -0.89
Ubr4A2AN08 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC9.49□□□□□ -0.89
Ubr4A2AN08 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC9.49□□□□□ -0.89
Ubr4A2AN08 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC9.49□□□□□ -0.89
Ubr4A2AN08 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC9.49□□□□□ -0.89
Ubr4A2AN08 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Ubr4A2AN08 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Ubr4A2AN08 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC9.49□□□□□ -0.89
Ubr4A2AN08 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Ubr4A2AN08 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC9.49□□□□□ -0.89
Ubr4A2AN08 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Ubr4A2AN08 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Ubr4A2AN08 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Ubr4A2AN08 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Ubr4A2AN08 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Ubr4A2AN08 H2af-ps-201ENSMUST00000119066 295 ntBASIC9.48□□□□□ -0.89
Ubr4A2AN08 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC9.48□□□□□ -0.89
Ubr4A2AN08 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Ubr4A2AN08 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Ubr4A2AN08 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Ubr4A2AN08 Gm9731-201ENSMUST00000209480 747 ntBASIC9.48□□□□□ -0.89
Ubr4A2AN08 Psmb5-202ENSMUST00000227257 622 ntBASIC9.48□□□□□ -0.89
Ubr4A2AN08 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC9.48□□□□□ -0.89
Ubr4A2AN08 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Ubr4A2AN08 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Ubr4A2AN08 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Ubr4A2AN08 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Ubr4A2AN08 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC9.48□□□□□ -0.89
Ubr4A2AN08 Gm44357-201ENSMUST00000195897 142 ntBASIC9.48□□□□□ -0.89
Ubr4A2AN08 Gm19658-201ENSMUST00000196231 138 ntBASIC9.48□□□□□ -0.89
Ubr4A2AN08 Gm44367-201ENSMUST00000196836 138 ntBASIC9.48□□□□□ -0.89
Ubr4A2AN08 Gm44350-201ENSMUST00000197197 138 ntBASIC9.48□□□□□ -0.89
Ubr4A2AN08 Gm44390-201ENSMUST00000197533 144 ntBASIC9.48□□□□□ -0.89
Ubr4A2AN08 Gm44313-201ENSMUST00000198018 138 ntBASIC9.48□□□□□ -0.89
Ubr4A2AN08 Gm44486-201ENSMUST00000198508 138 ntBASIC9.48□□□□□ -0.89
Ubr4A2AN08 Gm44454-201ENSMUST00000198541 138 ntBASIC9.48□□□□□ -0.89
Ubr4A2AN08 Gm44314-201ENSMUST00000199263 138 ntBASIC9.48□□□□□ -0.89
Ubr4A2AN08 Gm44394-201ENSMUST00000199558 138 ntBASIC9.48□□□□□ -0.89
Ubr4A2AN08 Gm44484-201ENSMUST00000199873 138 ntBASIC9.48□□□□□ -0.89
Ubr4A2AN08 Gm44466-201ENSMUST00000200264 138 ntBASIC9.48□□□□□ -0.89
Ubr4A2AN08 Gm44359-201ENSMUST00000200671 138 ntBASIC9.48□□□□□ -0.89
Ubr4A2AN08 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Ubr4A2AN08 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Ubr4A2AN08 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Ubr4A2AN08 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Ubr4A2AN08 Gm7638-201ENSMUST00000121348 967 ntBASIC9.48□□□□□ -0.89
Ubr4A2AN08 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Ubr4A2AN08 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ubr4A2AN08 Gm5913-201ENSMUST00000119397 1399 ntBASIC9.47□□□□□ -0.89
Ubr4A2AN08 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ubr4A2AN08 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ubr4A2AN08 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ubr4A2AN08 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ubr4A2AN08 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC9.47□□□□□ -0.89
Ubr4A2AN08 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC9.47□□□□□ -0.89
Ubr4A2AN08 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Ubr4A2AN08 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ubr4A2AN08 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ubr4A2AN08 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ubr4A2AN08 Gm26039-201ENSMUST00000158152 144 ntBASIC9.47□□□□□ -0.89
Ubr4A2AN08 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ubr4A2AN08 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Ubr4A2AN08 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC9.47□□□□□ -0.89
Ubr4A2AN08 Gm9694-201ENSMUST00000193347 1189 ntBASIC9.47□□□□□ -0.89
Ubr4A2AN08 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC9.47□□□□□ -0.89
Ubr4A2AN08 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC9.47□□□□□ -0.89
Ubr4A2AN08 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ubr4A2AN08 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Ubr4A2AN08 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ubr4A2AN08 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ubr4A2AN08 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ubr4A2AN08 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Ubr4A2AN08 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ubr4A2AN08 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ubr4A2AN08 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Ubr4A2AN08 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Ubr4A2AN08 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Ubr4A2AN08 Gm27397-201ENSMUST00000184997 107 ntBASIC9.46□□□□□ -0.89
Ubr4A2AN08 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Ubr4A2AN08 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC9.46□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms