Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Shroom2A2ALU4 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Shroom2A2ALU4 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Shroom2A2ALU4 Gm5264-201ENSMUST00000190584 848 ntBASIC28.45■■■□□ 2.14
Shroom2A2ALU4 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Shroom2A2ALU4 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC28.45■■■□□ 2.14
Shroom2A2ALU4 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Shroom2A2ALU4 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Shroom2A2ALU4 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Shroom2A2ALU4 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Shroom2A2ALU4 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Shroom2A2ALU4 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC28.43■■■□□ 2.14
Shroom2A2ALU4 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Shroom2A2ALU4 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC28.43■■■□□ 2.14
Shroom2A2ALU4 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC28.43■■■□□ 2.14
Shroom2A2ALU4 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC28.43■■■□□ 2.14
Shroom2A2ALU4 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC28.42■■■□□ 2.14
Shroom2A2ALU4 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
Shroom2A2ALU4 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC28.42■■■□□ 2.14
Shroom2A2ALU4 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC28.42■■■□□ 2.14
Shroom2A2ALU4 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC28.42■■■□□ 2.14
Shroom2A2ALU4 CT943659.1-201ENSMUST00000215459 326 ntBASIC28.42■■■□□ 2.14
Shroom2A2ALU4 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Shroom2A2ALU4 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Shroom2A2ALU4 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC28.42■■■□□ 2.14
Shroom2A2ALU4 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC28.42■■■□□ 2.14
Shroom2A2ALU4 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC28.42■■■□□ 2.14
Shroom2A2ALU4 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Shroom2A2ALU4 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Shroom2A2ALU4 Il3ra-202ENSMUST00000223589 738 ntBASIC28.41■■■□□ 2.14
Shroom2A2ALU4 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Shroom2A2ALU4 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC28.4■■■□□ 2.14
Shroom2A2ALU4 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC28.4■■■□□ 2.14
Shroom2A2ALU4 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC28.4■■■□□ 2.14
Shroom2A2ALU4 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC28.4■■■□□ 2.14
Shroom2A2ALU4 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
Shroom2A2ALU4 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
Shroom2A2ALU4 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Shroom2A2ALU4 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
Shroom2A2ALU4 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
Shroom2A2ALU4 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC28.4■■■□□ 2.14
Shroom2A2ALU4 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
Shroom2A2ALU4 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC28.4■■■□□ 2.14
Shroom2A2ALU4 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Shroom2A2ALU4 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC28.39■■■□□ 2.14
Shroom2A2ALU4 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
Shroom2A2ALU4 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC28.39■■■□□ 2.13
Shroom2A2ALU4 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC28.39■■■□□ 2.13
Shroom2A2ALU4 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
Shroom2A2ALU4 Gm24841-201ENSMUST00000158676 357 ntBASIC28.39■■■□□ 2.13
Shroom2A2ALU4 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC28.39■■■□□ 2.13
Shroom2A2ALU4 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC28.39■■■□□ 2.13
Shroom2A2ALU4 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC28.38■■■□□ 2.13
Shroom2A2ALU4 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC28.38■■■□□ 2.13
Shroom2A2ALU4 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC28.38■■■□□ 2.13
Shroom2A2ALU4 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Shroom2A2ALU4 Mir5131-201ENSMUST00000175426 93 ntBASIC28.38■■■□□ 2.13
Shroom2A2ALU4 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC28.38■■■□□ 2.13
Shroom2A2ALU4 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Shroom2A2ALU4 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Shroom2A2ALU4 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC28.37■■■□□ 2.13
Shroom2A2ALU4 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC28.37■■■□□ 2.13
Shroom2A2ALU4 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC28.37■■■□□ 2.13
Shroom2A2ALU4 Gm5364-201ENSMUST00000216789 889 ntBASIC28.37■■■□□ 2.13
Shroom2A2ALU4 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
Shroom2A2ALU4 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC28.37■■■□□ 2.13
Shroom2A2ALU4 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Shroom2A2ALU4 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Shroom2A2ALU4 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC28.36■■■□□ 2.13
Shroom2A2ALU4 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Shroom2A2ALU4 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Shroom2A2ALU4 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Shroom2A2ALU4 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC28.36■■■□□ 2.13
Shroom2A2ALU4 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Shroom2A2ALU4 Gm14057-201ENSMUST00000120631 482 ntBASIC28.36■■■□□ 2.13
Shroom2A2ALU4 Gm15372-201ENSMUST00000120729 834 ntBASIC28.36■■■□□ 2.13
Shroom2A2ALU4 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC28.36■■■□□ 2.13
Shroom2A2ALU4 Gm37805-201ENSMUST00000192612 1094 ntBASIC28.36■■■□□ 2.13
Shroom2A2ALU4 Gm43438-201ENSMUST00000198133 379 ntBASIC28.36■■■□□ 2.13
Shroom2A2ALU4 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC28.36■■■□□ 2.13
Shroom2A2ALU4 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Shroom2A2ALU4 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
Shroom2A2ALU4 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
Shroom2A2ALU4 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC28.36■■■□□ 2.13
Shroom2A2ALU4 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC28.36■■■□□ 2.13
Shroom2A2ALU4 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Shroom2A2ALU4 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Shroom2A2ALU4 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC28.35■■■□□ 2.13
Shroom2A2ALU4 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC28.35■■■□□ 2.13
Shroom2A2ALU4 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC28.35■■■□□ 2.13
Shroom2A2ALU4 Gm12350-201ENSMUST00000121208 462 ntBASIC28.35■■■□□ 2.13
Shroom2A2ALU4 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC28.35■■■□□ 2.13
Shroom2A2ALU4 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Shroom2A2ALU4 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
Shroom2A2ALU4 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Shroom2A2ALU4 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Shroom2A2ALU4 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Shroom2A2ALU4 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC28.34■■■□□ 2.13
Shroom2A2ALU4 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Shroom2A2ALU4 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms