Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Gm3854A0A1B0GSS6 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gm3854A0A1B0GSS6 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gm3854A0A1B0GSS6 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gm3854A0A1B0GSS6 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.92■□□□□ 0.46
Gm3854A0A1B0GSS6 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gm3854A0A1B0GSS6 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Gm3854A0A1B0GSS6 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Gm3854A0A1B0GSS6 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.92■□□□□ 0.46
Gm3854A0A1B0GSS6 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gm3854A0A1B0GSS6 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.92■□□□□ 0.46
Gm3854A0A1B0GSS6 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Gm3854A0A1B0GSS6 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Gm3854A0A1B0GSS6 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm3854A0A1B0GSS6 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm3854A0A1B0GSS6 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm3854A0A1B0GSS6 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Gm3854A0A1B0GSS6 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm3854A0A1B0GSS6 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm3854A0A1B0GSS6 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.91■□□□□ 0.46
Gm3854A0A1B0GSS6 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Gm3854A0A1B0GSS6 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm3854A0A1B0GSS6 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
Gm3854A0A1B0GSS6 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Gm3854A0A1B0GSS6 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm3854A0A1B0GSS6 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.91■□□□□ 0.46
Gm3854A0A1B0GSS6 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm3854A0A1B0GSS6 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm3854A0A1B0GSS6 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm3854A0A1B0GSS6 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Gm3854A0A1B0GSS6 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Gm3854A0A1B0GSS6 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm3854A0A1B0GSS6 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Gm3854A0A1B0GSS6 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.9■□□□□ 0.46
Gm3854A0A1B0GSS6 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Gm3854A0A1B0GSS6 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Gm3854A0A1B0GSS6 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.9■□□□□ 0.46
Gm3854A0A1B0GSS6 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.9■□□□□ 0.46
Gm3854A0A1B0GSS6 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.9■□□□□ 0.46
Gm3854A0A1B0GSS6 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm3854A0A1B0GSS6 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm3854A0A1B0GSS6 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Gm3854A0A1B0GSS6 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Gm3854A0A1B0GSS6 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
Gm3854A0A1B0GSS6 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Gm3854A0A1B0GSS6 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Gm3854A0A1B0GSS6 Gm23634-201ENSMUST00000175071 91 ntBASIC17.89■□□□□ 0.45
Gm3854A0A1B0GSS6 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.89■□□□□ 0.45
Gm3854A0A1B0GSS6 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Gm3854A0A1B0GSS6 Gm38027-201ENSMUST00000192315 235 ntBASIC17.89■□□□□ 0.45
Gm3854A0A1B0GSS6 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.89■□□□□ 0.45
Gm3854A0A1B0GSS6 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm3854A0A1B0GSS6 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Gm3854A0A1B0GSS6 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm3854A0A1B0GSS6 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm3854A0A1B0GSS6 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Gm3854A0A1B0GSS6 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm3854A0A1B0GSS6 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm3854A0A1B0GSS6 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Gm3854A0A1B0GSS6 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.88■□□□□ 0.45
Gm3854A0A1B0GSS6 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Gm3854A0A1B0GSS6 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.88■□□□□ 0.45
Gm3854A0A1B0GSS6 Gm45058-201ENSMUST00000205810 766 ntBASIC17.88■□□□□ 0.45
Gm3854A0A1B0GSS6 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Gm3854A0A1B0GSS6 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm3854A0A1B0GSS6 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm3854A0A1B0GSS6 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm3854A0A1B0GSS6 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm3854A0A1B0GSS6 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm3854A0A1B0GSS6 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Gm3854A0A1B0GSS6 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm3854A0A1B0GSS6 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Gm3854A0A1B0GSS6 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm3854A0A1B0GSS6 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Gm3854A0A1B0GSS6 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm3854A0A1B0GSS6 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.87■□□□□ 0.45
Gm3854A0A1B0GSS6 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm3854A0A1B0GSS6 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm3854A0A1B0GSS6 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm3854A0A1B0GSS6 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Gm3854A0A1B0GSS6 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Gm3854A0A1B0GSS6 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Gm3854A0A1B0GSS6 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.87■□□□□ 0.45
Gm3854A0A1B0GSS6 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm3854A0A1B0GSS6 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm3854A0A1B0GSS6 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.87■□□□□ 0.45
Gm3854A0A1B0GSS6 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm3854A0A1B0GSS6 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Gm3854A0A1B0GSS6 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.86■□□□□ 0.45
Gm3854A0A1B0GSS6 Mir5130-201ENSMUST00000175160 84 ntBASIC17.86■□□□□ 0.45
Gm3854A0A1B0GSS6 Gm2274-201ENSMUST00000184539 609 ntBASIC17.86■□□□□ 0.45
Gm3854A0A1B0GSS6 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.86■□□□□ 0.45
Gm3854A0A1B0GSS6 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm3854A0A1B0GSS6 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm3854A0A1B0GSS6 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm3854A0A1B0GSS6 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.86■□□□□ 0.45
Gm3854A0A1B0GSS6 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Gm3854A0A1B0GSS6 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Gm3854A0A1B0GSS6 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.86■□□□□ 0.45
Gm3854A0A1B0GSS6 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms