Protein–RNA interactions for Protein: A0A140T8M6

Igkv3-5, Immunoglobulin kappa chain variable 3-5 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-5A0A140T8M6 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-5A0A140T8M6 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-5A0A140T8M6 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-5A0A140T8M6 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-5A0A140T8M6 Gm14281-201ENSMUST00000121700 1294 ntBASIC11.29□□□□□ -0.6
Igkv3-5A0A140T8M6 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-5A0A140T8M6 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC11.29□□□□□ -0.6
Igkv3-5A0A140T8M6 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC11.29□□□□□ -0.6
Igkv3-5A0A140T8M6 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Igkv3-5A0A140T8M6 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
Igkv3-5A0A140T8M6 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-5A0A140T8M6 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-5A0A140T8M6 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Igkv3-5A0A140T8M6 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Igkv3-5A0A140T8M6 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-5A0A140T8M6 Gm15853-202ENSMUST00000195518 2041 ntBASIC11.29□□□□□ -0.6
Igkv3-5A0A140T8M6 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-5A0A140T8M6 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-5A0A140T8M6 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-5A0A140T8M6 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-5A0A140T8M6 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-5A0A140T8M6 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Igkv3-5A0A140T8M6 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-5A0A140T8M6 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-5A0A140T8M6 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-5A0A140T8M6 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-5A0A140T8M6 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv3-5A0A140T8M6 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv3-5A0A140T8M6 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Igkv3-5A0A140T8M6 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv3-5A0A140T8M6 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Igkv3-5A0A140T8M6 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv3-5A0A140T8M6 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv3-5A0A140T8M6 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv3-5A0A140T8M6 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv3-5A0A140T8M6 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv3-5A0A140T8M6 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv3-5A0A140T8M6 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv3-5A0A140T8M6 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv3-5A0A140T8M6 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC11.28□□□□□ -0.6
Igkv3-5A0A140T8M6 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
Igkv3-5A0A140T8M6 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Igkv3-5A0A140T8M6 Gm19094-201ENSMUST00000209791 1246 ntBASIC11.28□□□□□ -0.6
Igkv3-5A0A140T8M6 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv3-5A0A140T8M6 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv3-5A0A140T8M6 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv3-5A0A140T8M6 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Igkv3-5A0A140T8M6 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv3-5A0A140T8M6 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Igkv3-5A0A140T8M6 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Igkv3-5A0A140T8M6 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Igkv3-5A0A140T8M6 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Igkv3-5A0A140T8M6 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Igkv3-5A0A140T8M6 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Igkv3-5A0A140T8M6 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Igkv3-5A0A140T8M6 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Igkv3-5A0A140T8M6 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Igkv3-5A0A140T8M6 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Igkv3-5A0A140T8M6 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Igkv3-5A0A140T8M6 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC11.27□□□□□ -0.61
Igkv3-5A0A140T8M6 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC11.27□□□□□ -0.61
Igkv3-5A0A140T8M6 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Igkv3-5A0A140T8M6 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Igkv3-5A0A140T8M6 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Igkv3-5A0A140T8M6 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Igkv3-5A0A140T8M6 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Igkv3-5A0A140T8M6 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Igkv3-5A0A140T8M6 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Igkv3-5A0A140T8M6 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Igkv3-5A0A140T8M6 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
Igkv3-5A0A140T8M6 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Igkv3-5A0A140T8M6 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv3-5A0A140T8M6 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv3-5A0A140T8M6 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Igkv3-5A0A140T8M6 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC11.26□□□□□ -0.61
Igkv3-5A0A140T8M6 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Igkv3-5A0A140T8M6 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv3-5A0A140T8M6 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Igkv3-5A0A140T8M6 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv3-5A0A140T8M6 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv3-5A0A140T8M6 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC11.26□□□□□ -0.61
Igkv3-5A0A140T8M6 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv3-5A0A140T8M6 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv3-5A0A140T8M6 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC11.26□□□□□ -0.61
Igkv3-5A0A140T8M6 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC11.26□□□□□ -0.61
Igkv3-5A0A140T8M6 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
Igkv3-5A0A140T8M6 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC11.26□□□□□ -0.61
Igkv3-5A0A140T8M6 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv3-5A0A140T8M6 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv3-5A0A140T8M6 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv3-5A0A140T8M6 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv3-5A0A140T8M6 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Igkv3-5A0A140T8M6 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv3-5A0A140T8M6 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv3-5A0A140T8M6 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Igkv3-5A0A140T8M6 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv3-5A0A140T8M6 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Igkv3-5A0A140T8M6 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC11.26□□□□□ -0.61
Igkv3-5A0A140T8M6 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv3-5A0A140T8M6 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms