Protein–RNA interactions for Protein: A0A0J9YTW6

Scn2a, Sodium channel protein, mousemouse

Predictions only

Length 2,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2aA0A0J9YTW6 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.43■□□□□ 0.22
Scn2aA0A0J9YTW6 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn2aA0A0J9YTW6 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn2aA0A0J9YTW6 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.42■□□□□ 0.22
Scn2aA0A0J9YTW6 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn2aA0A0J9YTW6 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Scn2aA0A0J9YTW6 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.42■□□□□ 0.22
Scn2aA0A0J9YTW6 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Scn2aA0A0J9YTW6 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Scn2aA0A0J9YTW6 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Scn2aA0A0J9YTW6 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn2aA0A0J9YTW6 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn2aA0A0J9YTW6 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn2aA0A0J9YTW6 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Scn2aA0A0J9YTW6 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn2aA0A0J9YTW6 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Scn2aA0A0J9YTW6 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Scn2aA0A0J9YTW6 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn2aA0A0J9YTW6 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn2aA0A0J9YTW6 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn2aA0A0J9YTW6 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Scn2aA0A0J9YTW6 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Scn2aA0A0J9YTW6 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.41■□□□□ 0.22
Scn2aA0A0J9YTW6 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn2aA0A0J9YTW6 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn2aA0A0J9YTW6 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn2aA0A0J9YTW6 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn2aA0A0J9YTW6 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn2aA0A0J9YTW6 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn2aA0A0J9YTW6 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Scn2aA0A0J9YTW6 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn2aA0A0J9YTW6 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.4■□□□□ 0.22
Scn2aA0A0J9YTW6 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.4■□□□□ 0.22
Scn2aA0A0J9YTW6 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.4■□□□□ 0.22
Scn2aA0A0J9YTW6 Gm18666-201ENSMUST00000190039 958 ntBASIC16.4■□□□□ 0.22
Scn2aA0A0J9YTW6 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Scn2aA0A0J9YTW6 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn2aA0A0J9YTW6 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn2aA0A0J9YTW6 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn2aA0A0J9YTW6 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Scn2aA0A0J9YTW6 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn2aA0A0J9YTW6 Gm12382-201ENSMUST00000122005 922 ntBASIC16.4■□□□□ 0.22
Scn2aA0A0J9YTW6 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Scn2aA0A0J9YTW6 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.4■□□□□ 0.22
Scn2aA0A0J9YTW6 Gm10138-203ENSMUST00000206952 366 ntBASIC16.4■□□□□ 0.22
Scn2aA0A0J9YTW6 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
Scn2aA0A0J9YTW6 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Scn2aA0A0J9YTW6 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.22
Scn2aA0A0J9YTW6 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scn2aA0A0J9YTW6 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scn2aA0A0J9YTW6 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Scn2aA0A0J9YTW6 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scn2aA0A0J9YTW6 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Scn2aA0A0J9YTW6 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.39■□□□□ 0.21
Scn2aA0A0J9YTW6 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scn2aA0A0J9YTW6 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scn2aA0A0J9YTW6 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Scn2aA0A0J9YTW6 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Scn2aA0A0J9YTW6 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scn2aA0A0J9YTW6 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Scn2aA0A0J9YTW6 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Scn2aA0A0J9YTW6 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scn2aA0A0J9YTW6 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.39■□□□□ 0.21
Scn2aA0A0J9YTW6 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Scn2aA0A0J9YTW6 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Scn2aA0A0J9YTW6 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scn2aA0A0J9YTW6 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scn2aA0A0J9YTW6 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Scn2aA0A0J9YTW6 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Scn2aA0A0J9YTW6 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.38■□□□□ 0.21
Scn2aA0A0J9YTW6 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Scn2aA0A0J9YTW6 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Scn2aA0A0J9YTW6 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Scn2aA0A0J9YTW6 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn2aA0A0J9YTW6 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn2aA0A0J9YTW6 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.38■□□□□ 0.21
Scn2aA0A0J9YTW6 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Scn2aA0A0J9YTW6 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn2aA0A0J9YTW6 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.38■□□□□ 0.21
Scn2aA0A0J9YTW6 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn2aA0A0J9YTW6 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn2aA0A0J9YTW6 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn2aA0A0J9YTW6 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Scn2aA0A0J9YTW6 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn2aA0A0J9YTW6 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Scn2aA0A0J9YTW6 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn2aA0A0J9YTW6 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn2aA0A0J9YTW6 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn2aA0A0J9YTW6 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn2aA0A0J9YTW6 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.37■□□□□ 0.21
Scn2aA0A0J9YTW6 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.37■□□□□ 0.21
Scn2aA0A0J9YTW6 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.37■□□□□ 0.21
Scn2aA0A0J9YTW6 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn2aA0A0J9YTW6 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn2aA0A0J9YTW6 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn2aA0A0J9YTW6 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn2aA0A0J9YTW6 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.37■□□□□ 0.21
Scn2aA0A0J9YTW6 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn2aA0A0J9YTW6 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.36■□□□□ 0.21
Scn2aA0A0J9YTW6 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms