Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Atg4a-psA0A0G2JFS9 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Gm45606-201ENSMUST00000209836 2795 ntBASIC21.78■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC21.78■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Gm10653-202ENSMUST00000139570 835 ntBASIC21.77■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Gm10138-203ENSMUST00000206952 366 ntBASIC21.77■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Fcho2-208ENSMUST00000224992 2964 ntBASIC21.77■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Gm45560-201ENSMUST00000211492 1472 ntBASIC21.77■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC21.76■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Gm12669-201ENSMUST00000122162 1009 ntBASIC21.76■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC21.76■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Trmt13-210ENSMUST00000198454 880 ntBASIC21.76■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Atg4a-psA0A0G2JFS9 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC21.74■■□□□ 1.07
Atg4a-psA0A0G2JFS9 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Gm15375-201ENSMUST00000119510 849 ntBASIC21.74■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Gm13158-201ENSMUST00000122007 736 ntBASIC21.73■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC21.73■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Gm29241-201ENSMUST00000189260 1096 ntBASIC21.73■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Gm44878-201ENSMUST00000205812 1295 ntBASIC21.73■■□□□ 1.07
Atg4a-psA0A0G2JFS9 AC135637.1-201ENSMUST00000227750 365 ntBASIC21.73■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC21.73■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC21.72■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC21.72■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC21.72■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Mir6349-201ENSMUST00000184059 97 ntBASIC21.72■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC21.72■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Gm37194-201ENSMUST00000193092 3031 ntBASIC21.72■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Atg4a-psA0A0G2JFS9 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC21.71■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC21.71■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms