Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Gm6211-202ENSMUST00000167849 925 ntBASIC13.02□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC13.02□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Gm7291-201ENSMUST00000199147 382 ntBASIC13.02□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9n-2A0A0G2JDP3 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9n-2A0A0G2JDP3 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC13.01□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Gm37563-201ENSMUST00000192580 1513 ntBASIC13.01□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9n-2A0A0G2JDP3 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC13□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Gm7290-201ENSMUST00000104990 617 ntBASIC13□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Gm12918-201ENSMUST00000120234 636 ntBASIC13□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Gm15710-201ENSMUST00000121821 636 ntBASIC13□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Gm5075-201ENSMUST00000196916 622 ntBASIC13□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC13□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC13□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC13□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trav9n-2A0A0G2JDP3 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9n-2A0A0G2JDP3 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC12.99□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Mir5133-201ENSMUST00000174955 77 ntBASIC12.99□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Tgds-204ENSMUST00000228543 1594 ntBASIC12.98□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC12.98□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms