Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9-4A0A0B4J1K2 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9-4A0A0B4J1K2 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9-4A0A0B4J1K2 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Trav9-4A0A0B4J1K2 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9-4A0A0B4J1K2 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9-4A0A0B4J1K2 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9-4A0A0B4J1K2 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9-4A0A0B4J1K2 Gm44544-201ENSMUST00000207052 1844 ntBASIC13.43□□□□□ -0.26
Trav9-4A0A0B4J1K2 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9-4A0A0B4J1K2 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9-4A0A0B4J1K2 Flg-201ENSMUST00000050758 1488 ntBASIC13.43□□□□□ -0.26
Trav9-4A0A0B4J1K2 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9-4A0A0B4J1K2 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9-4A0A0B4J1K2 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9-4A0A0B4J1K2 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9-4A0A0B4J1K2 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Trav9-4A0A0B4J1K2 Gm15847-201ENSMUST00000121417 1065 ntBASIC13.43□□□□□ -0.26
Trav9-4A0A0B4J1K2 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9-4A0A0B4J1K2 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9-4A0A0B4J1K2 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
Trav9-4A0A0B4J1K2 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9-4A0A0B4J1K2 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC13.43□□□□□ -0.26
Trav9-4A0A0B4J1K2 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9-4A0A0B4J1K2 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9-4A0A0B4J1K2 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9-4A0A0B4J1K2 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC13.42□□□□□ -0.26
Trav9-4A0A0B4J1K2 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9-4A0A0B4J1K2 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9-4A0A0B4J1K2 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9-4A0A0B4J1K2 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC13.42□□□□□ -0.26
Trav9-4A0A0B4J1K2 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9-4A0A0B4J1K2 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9-4A0A0B4J1K2 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC13.42□□□□□ -0.26
Trav9-4A0A0B4J1K2 Gm27275-201ENSMUST00000184318 272 ntBASIC13.42□□□□□ -0.26
Trav9-4A0A0B4J1K2 Gm20049-201ENSMUST00000219950 730 ntBASIC13.42□□□□□ -0.26
Trav9-4A0A0B4J1K2 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9-4A0A0B4J1K2 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trav9-4A0A0B4J1K2 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9-4A0A0B4J1K2 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9-4A0A0B4J1K2 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9-4A0A0B4J1K2 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9-4A0A0B4J1K2 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9-4A0A0B4J1K2 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav9-4A0A0B4J1K2 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Trav9-4A0A0B4J1K2 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC13.41□□□□□ -0.26
Trav9-4A0A0B4J1K2 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav9-4A0A0B4J1K2 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav9-4A0A0B4J1K2 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav9-4A0A0B4J1K2 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav9-4A0A0B4J1K2 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav9-4A0A0B4J1K2 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav9-4A0A0B4J1K2 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav9-4A0A0B4J1K2 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav9-4A0A0B4J1K2 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav9-4A0A0B4J1K2 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav9-4A0A0B4J1K2 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav9-4A0A0B4J1K2 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav9-4A0A0B4J1K2 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav9-4A0A0B4J1K2 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav9-4A0A0B4J1K2 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9-4A0A0B4J1K2 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9-4A0A0B4J1K2 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9-4A0A0B4J1K2 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9-4A0A0B4J1K2 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9-4A0A0B4J1K2 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9-4A0A0B4J1K2 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9-4A0A0B4J1K2 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9-4A0A0B4J1K2 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Trav9-4A0A0B4J1K2 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav9-4A0A0B4J1K2 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9-4A0A0B4J1K2 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9-4A0A0B4J1K2 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9-4A0A0B4J1K2 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9-4A0A0B4J1K2 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9-4A0A0B4J1K2 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9-4A0A0B4J1K2 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9-4A0A0B4J1K2 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9-4A0A0B4J1K2 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC13.4□□□□□ -0.26
Trav9-4A0A0B4J1K2 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9-4A0A0B4J1K2 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9-4A0A0B4J1K2 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9-4A0A0B4J1K2 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9-4A0A0B4J1K2 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Trav9-4A0A0B4J1K2 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9-4A0A0B4J1K2 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9-4A0A0B4J1K2 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
Trav9-4A0A0B4J1K2 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9-4A0A0B4J1K2 Dio3-201ENSMUST00000097228 1449 ntBASIC13.39□□□□□ -0.27
Trav9-4A0A0B4J1K2 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9-4A0A0B4J1K2 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9-4A0A0B4J1K2 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9-4A0A0B4J1K2 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9-4A0A0B4J1K2 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9-4A0A0B4J1K2 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9-4A0A0B4J1K2 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9-4A0A0B4J1K2 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9-4A0A0B4J1K2 Gm11927-201ENSMUST00000118472 759 ntBASIC13.39□□□□□ -0.27
Trav9-4A0A0B4J1K2 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9-4A0A0B4J1K2 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms